RetrogeneDB ID: | retro_ttru_1483 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_114385:48255..48585(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHF5A | ||
Ensembl ID: | ENSTTRG00000003369 | ||
Aliases: | None | ||
Description: | PHD finger protein 5A [Source:HGNC Symbol;Acc:18000] |
Percent Identity: | 83.64 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAKHHPDLIFCRKQAGVAIGRLCEKCDGKCVICDSYVRPCTLVRICDECNYGSYQGRCVICGGPGVSDAY |
MAK.HPDLIFCRKQAGVAIGRLCE..D.KCVICDSY..PCTLV..CDECNYGSYQG.CVI.GGP.VSDAY | |
Retrocopy | MAKYHPDLIFCRKQAGVAIGRLCERWDVKCVICDSYMCPCTLVHMCDECNYGSYQGCCVIRGGPRVSDAY |
Parental | YCKECTIQEKDRDGCPKIVNLGSSKTDLFYERKKYGFKKR |
.CKECTIQEKDRDGCPKIV..GSSKTDL.YERKK...KKR | |
Retrocopy | FCKECTIQEKDRDGCPKIVSFGSSKTDLVYERKK*DLKKR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |