RetrogeneDB ID: | retro_ogar_673 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873525.1:1467879..1468128(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000002629 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 69.88 % |
Parental protein coverage: | 76.85 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVG |
.GVQ..TISP.DGR...K..QTCVVHY.GMLED...FDSS.DRNKPFK.ML.KQEVI.GW..GVAQM.VG | |
Retrocopy | VGVQLGTISPEDGRPLLKCDQTCVVHYIGMLEDRQQFDSSQDRNKPFKSMLVKQEVIPGWKVGVAQMRVG |
Parental | QRAKLTISPDYAY |
Q.AKLT.SPD... | |
Retrocopy | QKAKLTVSPDWGH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000008303 | 4 retrocopies | |
Callithrix jacchus | ENSCJAG00000020908 | 4 retrocopies | |
Ciona savignyi | ENSCSAVG00000006859 | 1 retrocopy | |
Homo sapiens | ENSG00000088832 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000001729 | 3 retrocopies | |
Macaca mulatta | ENSMMUG00000015996 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000019554 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000009356 | 5 retrocopies | |
Otolemur garnettii | ENSOGAG00000002629 | 1 retrocopy |
retro_ogar_673 ,
|
Otolemur garnettii | ENSOGAG00000003012 | 2 retrocopies | |
Pongo abelii | ENSPPYG00000010852 | 5 retrocopies | |
Pan troglodytes | ENSPTRG00000013163 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000007188 | 1 retrocopy | |
Tursiops truncatus | ENSTTRG00000003547 | 3 retrocopies | |
Vicugna pacos | ENSVPAG00000011511 | 1 retrocopy |