Parental gene:

CSA.3865, ENSCSAVG00000006859

Aliases:None
Description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:H2Z293]
Organism:Pacific transparent sea squirt (Ciona savignyi)
Coordinates:reftig_2:1314990..1320012(-)


>ENSCSAVG00000006859
ATGGGAGTAACTGTGGAGACGATTACAGCTGGAGATGGTACAAATTTTCCAAAGTCTGGACAGACTGTCTGCGTTCATTA
TACAGGCACCCTGACAAATGGAAAGAAGTTTGACTCTTCAAGAGACCGCGGTAAAGCCTTCGAATTCGTAATCGGGAAAG
CACAGGTTATTCGCGGCTGGGATGAAGGTGTCATGCAGATGTCTGTCGGTCAAAGAGCCACACTGACTTGCACTCCCGAT
TATGCATACGGAGCCAACGGCATTGGAGGAGTGATTCCACCGAATGCTACATTGGTGTTCGATGTCGAGCTTCTTAAATT
GAAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000002797 ortholog_many2many 1 retrogene
retro_amel_1717,
Bos taurus ENSBTAG00000008303 ortholog_many2many 4 retrogenes
retro_btau_1220, retro_btau_1265, retro_btau_128, retro_btau_1760,
Callithrix jacchus ENSCJAG00000007700 ortholog_many2many 1 retrogene
retro_cjac_696,
Callithrix jacchus ENSCJAG00000020908 ortholog_many2many 4 retrogenes
retro_cjac_1544, retro_cjac_3889, retro_cjac_4157, retro_cjac_537,
Dasypus novemcinctus ENSDNOG00000005868 ortholog_many2many 16 retrogenes
retro_dnov_1289, retro_dnov_1577, retro_dnov_1666, retro_dnov_2236, retro_dnov_228, retro_dnov_2404, retro_dnov_2418, retro_dnov_2544, retro_dnov_2589, retro_dnov_263, retro_dnov_584, retro_dnov_621, retro_dnov_670, retro_dnov_684, retro_dnov_707, retro_dnov_937,
Equus caballus ENSECAG00000015664 ortholog_many2many 1 retrogene
retro_ecab_752,
Erinaceus europaeus ENSEEUG00000013920 ortholog_many2many 2 retrogenes
retro_eeur_135, retro_eeur_514,
Echinops telfairi ENSETEG00000007454 ortholog_many2many 1 retrogene
retro_etel_2059,
Echinops telfairi ENSETEG00000018990 ortholog_many2many 2 retrogenes
retro_etel_186, retro_etel_2071,
Felis catus ENSFCAG00000026097 ortholog_many2many 2 retrogenes
retro_fcat_168, retro_fcat_751,
Homo sapiens ENSG00000088832 ortholog_many2many 1 retrogene
retro_hsap_1198,
Homo sapiens ENSG00000119782 ortholog_many2many 1 retrogene
retro_hsap_1329,
Gorilla gorilla ENSGGOG00000001729 ortholog_many2many 3 retrogenes
retro_ggor_1494, retro_ggor_2344, retro_ggor_933,
Macropus eugenii ENSMEUG00000010689 ortholog_many2many 1 retrogene
retro_meug_14,
Microcebus murinus ENSMICG00000001530 ortholog_many2many 1 retrogene
retro_mmur_257,
Macaca mulatta ENSMMUG00000012341 ortholog_many2many 1 retrogene
retro_mmul_2171,
Macaca mulatta ENSMMUG00000015996 ortholog_many2many 1 retrogene
retro_mmul_10,
Monodelphis domestica ENSMODG00000019554 ortholog_many2many 2 retrogenes
retro_mdom_151, retro_mdom_733,
Mustela putorius furo ENSMPUG00000017946 ortholog_many2many 1 retrogene
retro_mputfur_1649,
Mus musculus ENSMUSG00000032966 ortholog_many2many 1 retrogene
retro_mmus_1293,
Nomascus leucogenys ENSNLEG00000000800 ortholog_many2many 1 retrogene
retro_nleu_1406,
Nomascus leucogenys ENSNLEG00000009356 ortholog_many2many 5 retrogenes
retro_nleu_2009, retro_nleu_2628, retro_nleu_2728, retro_nleu_2730, retro_nleu_604,
Otolemur garnettii ENSOGAG00000002629 ortholog_many2many 1 retrogene
retro_ogar_673,
Procavia capensis ENSPCAG00000008816 ortholog_many2many 2 retrogenes
retro_pcap_289, retro_pcap_37,
Pongo abelii ENSPPYG00000010852 ortholog_many2many 5 retrogenes
retro_pabe_1654, retro_pabe_1686, retro_pabe_2364, retro_pabe_2365, retro_pabe_998,
Pongo abelii ENSPPYG00000012604 ortholog_many2many 1 retrogene
retro_pabe_1105,
Pan troglodytes ENSPTRG00000011708 ortholog_many2many 1 retrogene
retro_ptro_906,
Pan troglodytes ENSPTRG00000013163 ortholog_many2many 2 retrogenes
retro_ptro_2983, retro_ptro_818,
Pteropus vampyrus ENSPVAG00000013840 ortholog_many2many 1 retrogene
retro_pvam_1367,
Rattus norvegicus ENSRNOG00000008822 ortholog_many2many 1 retrogene
retro_rnor_453,
Sorex araneus ENSSARG00000013808 ortholog_many2many 1 retrogene
retro_sara_24,
Sus scrofa ENSSSCG00000007188 ortholog_many2many 1 retrogene
retro_sscr_98,
Tupaia belangeri ENSTBEG00000012282 ortholog_many2many 1 retrogene
retro_tbel_56,
Tursiops truncatus ENSTTRG00000003547 ortholog_many2many 3 retrogenes
retro_ttru_1227, retro_ttru_802, retro_ttru_904,
Vicugna pacos ENSVPAG00000011511 ortholog_many2many 1 retrogene
retro_vpac_171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_csav_11 74.29 97.22
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Download FASTA sequences of all ENSCSAVG00000006859 retrocopies