Parental gene:

FKBP1A, ENSPTRG00000013163

Aliases:None
Description:Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:H2QJT5]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:20:1281200..1305337(-)


>ENSPTRG00000013163
ATGGGAGTGCAGGTGGAAACCATCTCCCCAGGAGACGGGCGCACCTTCCCCAAGCGCGGCCAGACCTGCGTGGTGCACTA
CACCGGGATGCTTGAAGATGGAAAGAAATTTGATTCCTCCCGGGACAGAAACAAGCCCTTTAAGTTTATGCTAGGCAAGC
AGGAGGTGATCCGAGGCTGGGAAGAAGGGGTTGCCCAGATGAGTGTGGGTCAGAGAGCCAAACTGACTATATCTCCAGAT
TATGCCTATGGTGCCACTGGGCACCCAGGCATCATCCCACCACATGCCACTCTCGTCTTCGATGTGGAGCTTCTAAAACT
GGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 168 .25 RPM
SRP007412_cerebellum 41 .66 RPM
SRP007412_heart 47 .33 RPM
SRP007412_kidney 89 .83 RPM
SRP007412_liver 48 .02 RPM
SRP007412_testis 44 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000008303 ortholog_one2many 4 retrogenes
retro_btau_1220, retro_btau_1265, retro_btau_128, retro_btau_1760,
Callithrix jacchus ENSCJAG00000020908 ortholog_one2one 4 retrogenes
retro_cjac_1544, retro_cjac_3889, retro_cjac_4157, retro_cjac_537,
Ciona savignyi ENSCSAVG00000006859 ortholog_many2many 1 retrogene
retro_csav_11,
Homo sapiens ENSG00000088832 ortholog_one2one 1 retrogene
retro_hsap_1198,
Gorilla gorilla ENSGGOG00000001729 ortholog_one2one 3 retrogenes
retro_ggor_1494, retro_ggor_2344, retro_ggor_933,
Macaca mulatta ENSMMUG00000015996 ortholog_one2many 1 retrogene
retro_mmul_10,
Monodelphis domestica ENSMODG00000019554 ortholog_one2many 2 retrogenes
retro_mdom_151, retro_mdom_733,
Nomascus leucogenys ENSNLEG00000009356 ortholog_one2one 5 retrogenes
retro_nleu_2009, retro_nleu_2628, retro_nleu_2728, retro_nleu_2730, retro_nleu_604,
Otolemur garnettii ENSOGAG00000002629 ortholog_one2one 1 retrogene
retro_ogar_673,
Pongo abelii ENSPPYG00000010852 ortholog_one2one 5 retrogenes
retro_pabe_1654, retro_pabe_1686, retro_pabe_2364, retro_pabe_2365, retro_pabe_998,
Pan troglodytes ENSPTRG00000004529 within_species_paralog 3 retrogenes
retro_ptro_2083, retro_ptro_3000, retro_ptro_3001,
Pan troglodytes ENSPTRG00000011708 within_species_paralog 1 retrogene
retro_ptro_906,
Sus scrofa ENSSSCG00000007188 ortholog_one2one 1 retrogene
retro_sscr_98,
Tursiops truncatus ENSTTRG00000003547 ortholog_one2one 3 retrogenes
retro_ttru_1227, retro_ttru_802, retro_ttru_904,
Vicugna pacos ENSVPAG00000011511 ortholog_one2one 1 retrogene
retro_vpac_171,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_818 80.37 99.07
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2. retro_ptro_2983 94.44 100.00
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Download FASTA sequences of all ENSPTRG00000013163 retrocopies