RetrogeneDB ID: | retro_pcap_79 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | GeneScaffold_4522:65270..65588(+) | ||
Located in intron of: | ENSPCAG00000016402 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL9 | ||
Ensembl ID: | ENSPCAG00000005834 | ||
Aliases: | None | ||
Description: | ribosomal protein L9 [Source:HGNC Symbol;Acc:10369] |
Percent Identity: | 85.85 % |
Parental protein coverage: | 55.21 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | GFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSN |
GFRYK.RS.YA.FPINVVIQENGSL.EI..FLGEK.I.RV.MRPGVACSVSQAQKDELILEGND.ELVSN | |
Retrocopy | GFRYKRRSAYAPFPINVVIQENGSLAEIQTFLGEKCICRVQMRPGVACSVSQAQKDELILEGNDTELVSN |
Parental | SAALIQQATTVKNKDIRKFLDGIYVSEKGTVQQADE |
SA.LIQQATTVK..DIRKF.DGIYVSEKGTVQ.ADE | |
Retrocopy | SAVLIQQATTVKKRDIRKFPDGIYVSEKGTVQLADE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |