RetrogeneDB ID: | retro_pcap_411 | ||
Retrocopylocation | Organism: | Hyrax (Procavia capensis) | |
Coordinates: | scaffold_73563:5642..5957(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL9 | ||
Ensembl ID: | ENSPCAG00000005834 | ||
Aliases: | None | ||
Description: | ribosomal protein L9 [Source:HGNC Symbol;Acc:10369] |
Percent Identity: | 81.9 % |
Parental protein coverage: | 54.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | FRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNS |
F.YK.RSVYAHF.IN.V.Q....LVEIRNFLGEKYI.RV..RPGVAC.VSQAQK.EL.L.GNDIELVSNS | |
Retrocopy | FHYKTRSVYAHFLINMVLQQKK*LVEIRNFLGEKYIHRV*TRPGVACAVSQAQKHELTLGGNDIELVSNS |
Parental | AALIQQATTVKNKDIRKFLDGIYVSEKGTVQQADE |
AALIQQATTVKNKDI.KFLDGIYVSEKGTVQQ..E | |
Retrocopy | AALIQQATTVKNKDIQKFLDGIYVSEKGTVQQGGE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |