RetrogeneDB ID: | retro_pvam_303 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | GeneScaffold_2413:105356..105622(-) | ||
Located in intron of: | ENSPVAG00000004745 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX6B1 | ||
Ensembl ID: | ENSPVAG00000012821 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit VIb polypeptide 1 (ubiquitous) [Source:HGNC Symbol;Acc:2280] |
Percent Identity: | 81.11 % |
Parental protein coverage: | 86.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VSNMAEDIKTKIKNYQTAPFDSRFPNQNQTRNCWQNYLDFHRCEKAMTAKGGDVSVCEWYRRV-YKSLCP |
VSNMAEDIK.KIKNYQ.APFDS.FPNQN.TRNCWQN.LDFH.CEKAMT.K.GDVSVCEWYR...YKSLCP | |
Retrocopy | VSNMAEDIKAKIKNYQIAPFDSHFPNQNETRNCWQNHLDFHCCEKAMTIKEGDVSVCEWYRFI<YKSLCP |
Parental | ISWVSTWDDRRAEGTFPGKI |
ISWVS..D...AEG.FPGKI | |
Retrocopy | ISWVSARDNCQAEGMFPGKI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |