RetrogeneDB ID: | retro_tsyr_26 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_424204:592..1027(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSTSYG00000012598 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | STMN2 | ||
Ensembl ID: | ENSTSYG00000014759 | ||
Aliases: | None | ||
Description: | stathmin-like 2 [Source:HGNC Symbol;Acc:10577] |
Percent Identity: | 73.68 % |
Parental protein coverage: | 74.3 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MEVKQINKRASGQAFELILKPPSPISEAPRTLASPKKKDLSLEEIQKKLEAAEERRKSQEAQVLKQLAEK |
..VK...KRASGQAFELIL.P.S..S.....L..PKKKDLSLEEIQKKLEAAEERRKS.EA.VLKQLAEK | |
Retrocopy | IQVKELEKRASGQAFELILSPQSKESVPEFPLSPPKKKDLSLEEIQKKLEAAEERRKSHEAEVLKQLAEK |
Parental | REHEREVLQKALEENNNFSKMAEEKLILKMEQIKENREANLAAIIERLQEKERHAAEVRRNKE |
REHE.EVLQKA.EENNNFSKM.EEKL..KME..KENREA..AA..ERL.EK..H..EVR.NKE | |
Retrocopy | REHEKEVLQKAAEENNNFSKMVEEKLTHKMEANKENREAQMAAKLERLREKDKHVEEVRKNKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Dasypus novemcinctus | ENSDNOG00000003373 | 3 retrocopies | |
Mustela putorius furo | ENSMPUG00000001863 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000027869 | 2 retrocopies | |
Oryzias latipes | ENSORLG00000008251 | 1 retrocopy | |
Sorex araneus | ENSSARG00000010989 | 1 retrocopy | |
Ictidomys tridecemlineatus | ENSSTOG00000025094 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000014759 | 1 retrocopy |
retro_tsyr_26 ,
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