Parental gene: | STMN2, ENSDNOG00000003373 |
| Aliases: | None |
| Description: | stathmin-like 2 [Source:HGNC Symbol;Acc:10577] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_1391:6451..59700(+) |
>ENSDNOG00000003373
ATGGCTAAAACAGCAATGGCCTACAAGGAAAAAATGAAGGAGCTGTCCATGCTGTCGCTGATCTGCTCTTGCTTTTACCC
AGAACCTCGCAACATCAACATCTACACTTACGATGATATGGAAGTGAAGCAAATCAACAAACGTGCCTCTGGCCAGGCTT
TCGAGCTGATCTTAAAGCCACCATCTCCTATCTCAGAAGCCCCAAGAACTTTAGCTTCTCCAAAGAAGAAAGACCTGTCC
CTGGAGGAGATCCAGAAAAAACTGGAGGCTGCAGAGGAAAGAAGAAAGTCTCAGGAGGCCCAGGTGCTGAAGCAATTGGC
AGAGAAGAGGGAACACGAGCGAGAAGTCCTTCAGAAGGCTTTGGAGGAGAACAACAACTTCAGCAAAATGGCGGAGGAAA
AGCTGATCCTGAAAATGGAACAAATTAAGGAAAACCGCGAGGCTAATCTAGCTGCTATTATTGAACGTCTGCAGGAAAAG
GAGAGGCATGCTGCTGAGGTGCGCAGGAACAAGGAGCTCCAGGTTGAACTGTCTGGCTGA
ATGGCTAAAACAGCAATGGCCTACAAGGAAAAAATGAAGGAGCTGTCCATGCTGTCGCTGATCTGCTCTTGCTTTTACCC
AGAACCTCGCAACATCAACATCTACACTTACGATGATATGGAAGTGAAGCAAATCAACAAACGTGCCTCTGGCCAGGCTT
TCGAGCTGATCTTAAAGCCACCATCTCCTATCTCAGAAGCCCCAAGAACTTTAGCTTCTCCAAAGAAGAAAGACCTGTCC
CTGGAGGAGATCCAGAAAAAACTGGAGGCTGCAGAGGAAAGAAGAAAGTCTCAGGAGGCCCAGGTGCTGAAGCAATTGGC
AGAGAAGAGGGAACACGAGCGAGAAGTCCTTCAGAAGGCTTTGGAGGAGAACAACAACTTCAGCAAAATGGCGGAGGAAA
AGCTGATCCTGAAAATGGAACAAATTAAGGAAAACCGCGAGGCTAATCTAGCTGCTATTATTGAACGTCTGCAGGAAAAG
GAGAGGCATGCTGCTGAGGTGCGCAGGAACAAGGAGCTCCAGGTTGAACTGTCTGGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 26 .06 RPM |
| SRP012922_cerebellum | 399 .90 RPM |
| SRP012922_heart | 0 .93 RPM |
| SRP012922_kidney | 1 .10 RPM |
| SRP012922_liver | 28 .17 RPM |
| SRP012922_lung | 15 .73 RPM |
| SRP012922_quadricep_muscle | 0 .52 RPM |
| SRP012922_spleen | 88 .82 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000003756 | within_species_paralog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001863 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000027869 | ortholog_one2one | 2 retrogenes | |
| Oryzias latipes | ENSORLG00000008251 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000010989 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000025094 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000014759 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_545 | 71.11 | 74.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_831 | 74.07 | 74.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_2381 | 61.48 | 74.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000003373 retrocopies