RetrogeneDB ID: | retro_ttru_61 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_1092:350836..351369(-) | ||
Located in intron of: | ENSTTRG00000006531 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000015372 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.59 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | NRFLQKWKRSHKRRQERINLPTKKCKQKGKGEQRESRLKWLTKRLKKTYLQKTEKLKMRRAQ-LLMKQER |
.R.LQKWKRS.KRRQERINL.TKKC..KGKGEQRE.RLKWLTKRLKKTYLQK.EKLK.RRAQ.L...... | |
Retrocopy | HRLLQKWKRSQKRRQERINLQTKKCR*KGKGEQRENRLKWLTKRLKKTYLQKMEKLKTRRAQPLMKQERK |
Parental | KKPSLIN-HTPGPISGPCFPSCTIQRNIFINYFVNASFLVALETFLKRKESHLIPFFKCKCFFLRGEIIC |
K.......H.PGPI.GPC.PSCTIQRNIF.NYFVNASFLV.LETFLKR.ESHLIPFFKCKC...RG.I.C | |
Retrocopy | KPSLINT<HAPGPITGPCLPSCTIQRNIFVNYFVNASFLVVLETFLKRRESHLIPFFKCKCXXXRGDITC |
Parental | WLFIFWYNQKI-WDIEWEALIV-LGVSL-TFHR-WRSFYIL |
WLFIFWYNQKI.WDIE...L...LG..L.TFHR.W.SFYIL | |
Retrocopy | WLFIFWYNQKI>WDIEYGRL*L>LGCEL>TFHRWWGSFYIL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000005727 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000013672 | 6 retrocopies | |
Otolemur garnettii | ENSOGAG00000033084 | 3 retrocopies | |
Tarsius syrichta | ENSTSYG00000005812 | 15 retrocopies | |
Tursiops truncatus | ENSTTRG00000015372 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000000013 | 7 retrocopies |