RetrogeneDB ID: | retro_ttru_680 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3064:292955..293448(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000015372 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 76.65 % |
Parental protein coverage: | 93.14 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 4 |
Parental | NRFLQKWKRSHKRRQERINLPTKKCKQKGKGEQRESRLKWLTKRLKKTYLQKTEKLKMRRAQLLMKQERK |
NRFLQKWKRS.KRRQERINLPTKKCKQKGKGEQRESRLKWLTKRLKKTYLQK.EKLKMRRAQLLMKQERK | |
Retrocopy | NRFLQKWKRSQKRRQERINLPTKKCKQKGKGEQRESRLKWLTKRLKKTYLQKMEKLKMRRAQLLMKQERK |
Parental | KPSLINHTPGPISGPCFPSCTIQRNIFIN-YFVNASF-LVALETFLKRKESHLIPFFKCKC-FFLRGEII |
KPSLIN.T....S..........R.IF....F....F.LVALETFLKRKESHLIPFFKCKC....RGEII | |
Retrocopy | KPSLINITHLVLSVVPVSLLVQSRGIFLS>LFCKCKF>LVALETFLKRKESHLIPFFKCKC>XXXRGEII |
Parental | CWLFIFWYNQKI-WDIEWEALIVLGVS |
CWLFIFWYNQKI.WDIE...L....VS | |
Retrocopy | CWLFIFWYNQKI>WDIEYGRL*LSWVS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Callithrix jacchus | ENSCJAG00000005727 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000013672 | 6 retrocopies | |
Otolemur garnettii | ENSOGAG00000033084 | 3 retrocopies | |
Tarsius syrichta | ENSTSYG00000005812 | 15 retrocopies | |
Tursiops truncatus | ENSTTRG00000015372 | 12 retrocopies | |
Vicugna pacos | ENSVPAG00000000013 | 7 retrocopies |