Parental gene:

YWHAQ, ENSBTAG00000002108

Aliases:None
Description:14-3-3 protein theta [Source:UniProtKB/Swiss-Prot;Acc:Q3SZI4]
Organism:Cow (Bos taurus)
Coordinates:11:87842279..87873674(+)


>ENSBTAG00000002108
ATGGAGAAGACGGAGCTGATCCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCCACCTGCATGAA
GGCCGTGACGGAGCAGGGCGCCGAGCTGTCCAACGAAGAGCGCAACCTGCTGTCGGTGGCCTACAAGAACGTGGTCGGGG
GCCGCCGGTCCGCCTGGAGGGTCATCTCCAGCATCGAGCAGAAGACCGACACCTCGGACAAGAAGTTGCAGCTGATCAAG
GACTACCGGGAGAAAGTGGAGTCCGAGCTGAGGTCCATCTGCACCACGGTCCTGGAATTGTTGGATAAGTATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGAGATTACTTCCGGTACCTTGCTGAAGTTGCTT
GTGGTGATGATCGGAAGCAAACGATAGATAATTCCCAAGGAGCTTACCAAGAGGCTTTCGATATAAGCAAGAAAGAGATG
CAACCCACACACCCCATCCGGCTGGGGCTGGCTCTTAACTTTTCTGTGTTCTACTATGAGATCCTCAATAACCCGGAACT
GGCCTGCACACTGGCTAAAACGGCTTTTGATGAGGCTATTGCAGAACTCGACACACTGAATGAAGACTCGTACAAAGACA
GCACCCTCATCATGCAGCTGCTGAGAGACAACCTCACATTATGGACATCAGACAGTGCAGGAGAAGAATGTGATGCGGCA
GAAGGGGCAGAAAACTAA

Library Parental gene expression (RPM)
SRP017611_brain 218 .30 RPM
SRP017611_kidney 154 .94 RPM
SRP017611_liver 50 .14 RPM
ERP005899_muscle 139 .84 RPM
ERP005899_liver 85 .07 RPM
SRP030211_testis 389 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000000236 within_species_paralog 4 retrogenes
retro_btau_1482, retro_btau_635, retro_btau_68, retro_btau_910,
Bos taurus ENSBTAG00000005664 other_paralog 3 retrogenes
retro_btau_1485, retro_btau_372, retro_btau_954,
Callithrix jacchus ENSCJAG00000006394 ortholog_one2one 2 retrogenes
retro_cjac_2197, retro_cjac_3127,
Echinops telfairi ENSETEG00000015359 ortholog_one2one 4 retrogenes
retro_etel_1027, retro_etel_1048, retro_etel_235, retro_etel_65,
Homo sapiens ENSG00000134308 ortholog_one2one 2 retrogenes
retro_hsap_3004, retro_hsap_8,
Gorilla gorilla ENSGGOG00000001569 ortholog_one2one 1 retrogene
retro_ggor_2081,
Myotis lucifugus ENSMLUG00000005383 ortholog_one2one 1 retrogene
retro_mluc_1817,
Monodelphis domestica ENSMODG00000014740 ortholog_one2one 1 retrogene
retro_mdom_1339,
Mustela putorius furo ENSMPUG00000013252 ortholog_one2one 2 retrogenes
retro_mputfur_1132, retro_mputfur_730,
Nomascus leucogenys ENSNLEG00000013534 ortholog_one2many 3 retrogenes
retro_nleu_2543, retro_nleu_750, retro_nleu_869,
Oryctolagus cuniculus ENSOCUG00000010482 ortholog_one2one 1 retrogene
retro_ocun_1463,
Pongo abelii ENSPPYG00000012663 ortholog_one2one 4 retrogenes
retro_pabe_1165, retro_pabe_2490, retro_pabe_3391, retro_pabe_3511,
Pan troglodytes ENSPTRG00000011641 ortholog_one2one 2 retrogenes
retro_ptro_2032, retro_ptro_3,
Pteropus vampyrus ENSPVAG00000005334 ortholog_one2one 1 retrogene
retro_pvam_983,
Rattus norvegicus ENSRNOG00000008104 possible_ortholog 5 retrogenes
retro_rnor_1569, retro_rnor_2065, retro_rnor_2123, retro_rnor_2180, retro_rnor_2746,
Sorex araneus ENSSARG00000012476 ortholog_one2one 4 retrogenes
retro_sara_1, retro_sara_162, retro_sara_179, retro_sara_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_86 72.27 96.33
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2. retro_btau_1180 91.84 100.00
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Download FASTA sequences of all ENSBTAG00000002108 retrocopies