Parental gene:

YWHAQ, ENSPPYG00000012663

Aliases:None
Description:14-3-3 protein theta [Source:UniProtKB/Swiss-Prot;Acc:Q5RFJ2]
Organism:Orangutan (Pongo abelii)
Coordinates:2a:103079185..103126713(+)


>ENSPPYG00000012663
ATGGAGAAGACTGAGCTGATCCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGATGACATGGCCACCTGCATGAA
GGCAGTGACCGAGCAGGGCGCCGAGCTGTCCAACGAGGAGCGCAACCTGCTCTCCGTGGCCTACAAGAACGTGGTCGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCTAGCATCGAGCAGAAGACCGACACCTCCGACAAGAAGTTGCAGCTGATTAAG
GACTATCGGGAGAAAGTGGAGTCCGAGCTGAGATCCATCTGCACCACGGTCCTGGAATTGTTGGATAAATATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGTGATTACTTCCGGTACCTTGCTGAAGTTGCAT
GTGGTGATGATCGAAAACAAACGATAGATAATTCCCAAGGAGCTTACCAAGAGGCGTTTGATATAAGCAAGAAAGAGATG
CAACCCACACACCCAATCCGCCTGGGGCTTGCTCTTAACTTTTCTGTATTTTACTATGAGATTCTTAATAACCCAGAGCT
TGCCTGCACGCTGGCTAAAACGGCTTTTGATGAGGCCATTGCTGAACTTGATACACTGAATGAAGACTCATACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACCTAACACTTTGGACATCAGACAGTGCAGGAGAAGAATGTGATGCGGCA
GAAGGGGCTGAAAACTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 98 .14 RPM
SRP007412_cerebellum 198 .82 RPM
SRP007412_heart 44 .76 RPM
SRP007412_kidney 53 .73 RPM
SRP007412_liver 27 .88 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000002108 ortholog_one2one 2 retrogenes
retro_btau_1180, retro_btau_86,
Callithrix jacchus ENSCJAG00000006394 ortholog_one2one 2 retrogenes
retro_cjac_2197, retro_cjac_3127,
Echinops telfairi ENSETEG00000015359 ortholog_one2one 4 retrogenes
retro_etel_1027, retro_etel_1048, retro_etel_235, retro_etel_65,
Homo sapiens ENSG00000134308 ortholog_one2one 2 retrogenes
retro_hsap_3004, retro_hsap_8,
Gorilla gorilla ENSGGOG00000001569 ortholog_one2one 1 retrogene
retro_ggor_2081,
Macropus eugenii ENSMEUG00000014442 possible_ortholog 7 retrogenes
retro_meug_1122, retro_meug_1208, retro_meug_1259, retro_meug_1549, retro_meug_1918, retro_meug_2106, retro_meug_538,
Myotis lucifugus ENSMLUG00000005383 ortholog_one2one 1 retrogene
retro_mluc_1817,
Monodelphis domestica ENSMODG00000014740 ortholog_one2one 1 retrogene
retro_mdom_1339,
Mustela putorius furo ENSMPUG00000013252 ortholog_one2one 2 retrogenes
retro_mputfur_1132, retro_mputfur_730,
Oryctolagus cuniculus ENSOCUG00000010482 ortholog_one2one 1 retrogene
retro_ocun_1463,
Pongo abelii ENSPPYG00000007769 other_paralog 4 retrogenes
retro_pabe_1644, retro_pabe_1646, retro_pabe_2107, retro_pabe_3219,
Pongo abelii ENSPPYG00000011041 within_species_paralog 5 retrogenes
retro_pabe_3453, retro_pabe_3454, retro_pabe_3519, retro_pabe_3520, retro_pabe_692,
Pongo abelii ENSPPYG00000018791 within_species_paralog 7 retrogenes
retro_pabe_103, retro_pabe_1242, retro_pabe_2047, retro_pabe_3417, retro_pabe_3740, retro_pabe_556, retro_pabe_89,
Pelodiscus sinensis ENSPSIG00000012692 possible_ortholog 1 retrogene
retro_psin_2,
Pan troglodytes ENSPTRG00000011641 ortholog_one2one 2 retrogenes
retro_ptro_2032, retro_ptro_3,
Pteropus vampyrus ENSPVAG00000005334 ortholog_one2one 1 retrogene
retro_pvam_983,
Rattus norvegicus ENSRNOG00000008104 possible_ortholog 5 retrogenes
retro_rnor_1569, retro_rnor_2065, retro_rnor_2123, retro_rnor_2180, retro_rnor_2746,
Sorex araneus ENSSARG00000012476 ortholog_one2one 4 retrogenes
retro_sara_1, retro_sara_162, retro_sara_179, retro_sara_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1165 67.44 52.65
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2. retro_pabe_2490 84.15 99.18
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3. retro_pabe_3391 71.49 100.00
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4. retro_pabe_3511 70.23 86.53
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Download FASTA sequences of all ENSPPYG00000012663 retrocopies