Parental gene:

Ywhaq, ENSRNOG00000008104

Aliases:Ywhaq, 14-3-3t
Description:14-3-3 protein theta [Source:UniProtKB/Swiss-Prot;Acc:P68255]
Organism:Rat (Rattus norvegicus)
Coordinates:6:60331002..60361242(-)


>ENSRNOG00000008104
ATGGAGAAGACCGAGCTGATCCAGAAGGCCAAGCTGGCCGAGCAGGCCGAGCGCTACGACGACATGGCCACCTGCATGAA
AGCCGTGACGGAGCAGGGCGCCGAGCTGTCCAACGAGGAGCGCAACCTGCTATCTGTGGCCTACAAGAACGTGGTCGGGG
GCCGCAGGTCCGCCTGGAGGGTCATCTCGAGCATTGAGCAGAAGACCGATACCTCGGACAAGAAGTTGCAGCTGATCAAG
GACTATCGGGAGAAAGTGGAGTCTGAGCTGAGGTCCATCTGCACCACGGTCCTGGAATTGTTGGATAAGTATTTAATAGC
CAATGCAACTAATCCAGAGAGTAAGGTCTTCTATCTGAAAATGAAGGGAGATTATTTCCGGTATCTTGCTGAAGTCGCTT
GTGGTGATGATCGAAAACAAACGATAGAAAATTCCCAAGGAGCCTACCAAGAGGCATTTGATATAAGCAAGAAAGAGATG
CAACCTACACATCCGATCCGCCTGGGGCTGGCTCTTAACTTTTCTGTATTTTACTATGAGATCCTTAATAATCCCGAGCT
TGCCTGCACACTGGCTAAAACGGCTTTTGATGAAGCCATCGCCGAGCTTGATACACTGAATGAAGACTCCTACAAAGACA
GCACCCTCATCATGCAGTTGCTTAGAGACAACTTAACATTATGGACATCAGACAGTGCAGGAGAAGAATGTGATGCAGCT
GAGGGGGCTGAGAACTAA

Library Parental gene expression (RPM)
SRP017611_liver 31 .00 RPM
SRP017611_kidney 124 .28 RPM
SRP017611_brain 218 .35 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008618 possible_ortholog 4 retrogenes
retro_amel_1214, retro_amel_1382, retro_amel_1837, retro_amel_917,
Bos taurus ENSBTAG00000002108 possible_ortholog 2 retrogenes
retro_btau_1180, retro_btau_86,
Choloepus hoffmanni ENSCHOG00000004661 possible_ortholog 13 retrogenes
retro_chof_136, retro_chof_1427, retro_chof_1605, retro_chof_1835, retro_chof_2026, retro_chof_2115, retro_chof_2134, retro_chof_2233, retro_chof_429, retro_chof_481, retro_chof_489, retro_chof_527, retro_chof_863,
Callithrix jacchus ENSCJAG00000006394 possible_ortholog 2 retrogenes
retro_cjac_2197, retro_cjac_3127,
Cavia porcellus ENSCPOG00000011321 possible_ortholog 4 retrogenes
retro_cpor_135, retro_cpor_1463, retro_cpor_616, retro_cpor_668,
Equus caballus ENSECAG00000004925 ortholog_one2one 1 retrogene
retro_ecab_134,
Echinops telfairi ENSETEG00000015359 ortholog_one2many 4 retrogenes
retro_etel_1027, retro_etel_1048, retro_etel_235, retro_etel_65,
Felis catus ENSFCAG00000007854 ortholog_one2one 2 retrogenes
retro_fcat_1702, retro_fcat_771,
Homo sapiens ENSG00000134308 possible_ortholog 2 retrogenes
retro_hsap_3004, retro_hsap_8,
Gorilla gorilla ENSGGOG00000001569 possible_ortholog 1 retrogene
retro_ggor_2081,
Macropus eugenii ENSMEUG00000014442 possible_ortholog 7 retrogenes
retro_meug_1122, retro_meug_1208, retro_meug_1259, retro_meug_1549, retro_meug_1918, retro_meug_2106, retro_meug_538,
Myotis lucifugus ENSMLUG00000005383 ortholog_one2many 1 retrogene
retro_mluc_1817,
Monodelphis domestica ENSMODG00000014740 ortholog_one2many 1 retrogene
retro_mdom_1339,
Mustela putorius furo ENSMPUG00000013252 possible_ortholog 2 retrogenes
retro_mputfur_1132, retro_mputfur_730,
Mus musculus ENSMUSG00000076432 ortholog_one2one 10 retrogenes
retro_mmus_1076, retro_mmus_1378, retro_mmus_1926, retro_mmus_2250, retro_mmus_2299, retro_mmus_2471, retro_mmus_2689, retro_mmus_3250, retro_mmus_3308, retro_mmus_406,
Nomascus leucogenys ENSNLEG00000013534 possible_ortholog 3 retrogenes
retro_nleu_2543, retro_nleu_750, retro_nleu_869,
Oryctolagus cuniculus ENSOCUG00000010482 ortholog_one2many 1 retrogene
retro_ocun_1463,
Otolemur garnettii ENSOGAG00000000547 ortholog_one2one 3 retrogenes
retro_ogar_1047, retro_ogar_1732, retro_ogar_39,
Pongo abelii ENSPPYG00000012663 possible_ortholog 4 retrogenes
retro_pabe_1165, retro_pabe_2490, retro_pabe_3391, retro_pabe_3511,
Pelodiscus sinensis ENSPSIG00000012692 possible_ortholog 1 retrogene
retro_psin_2,
Pan troglodytes ENSPTRG00000011641 possible_ortholog 2 retrogenes
retro_ptro_2032, retro_ptro_3,
Pteropus vampyrus ENSPVAG00000005334 possible_ortholog 1 retrogene
retro_pvam_983,
Sorex araneus ENSSARG00000012476 ortholog_one2many 4 retrogenes
retro_sara_1, retro_sara_162, retro_sara_179, retro_sara_23,
Tursiops truncatus ENSTTRG00000000871 ortholog_one2one 4 retrogenes
retro_ttru_1006, retro_ttru_1109, retro_ttru_1530, retro_ttru_1536,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1569 72.41 82.04
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2. retro_rnor_2065 96.48 92.65
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3. retro_rnor_2123 89.76 83.27
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4. retro_rnor_2180 80.12 64.49
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5. retro_rnor_2746 86.52 57.14
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Download FASTA sequences of all ENSRNOG00000008104 retrocopies