Parental gene:

ACTG1, ENSBTAG00000006189

Aliases:None
Description:Actin, cytoplasmic 2 Actin, cytoplasmic 2, N-terminally processed [Source:UniProtKB/Swiss-Prot;Acc:P63258]
Organism:Cow (Bos taurus)
Coordinates:19:51868428..51871276(+)


>ENSBTAG00000006189
ATGGAAGAAGAAATTGCCGCCCTCGTCATCGACAATGGTTCTGGCATGTGCAAAGCTGGCTTTGCTGGGGATGACGCCCC
CCGGGCCGTGTTCCCGTCCATCGTTGGGCGTCCCCGACACCAGGGCGTCATGGTGGGCATGGGGCAGAAGGACAGCTACG
TGGGCGACGAGGCCCAGAGCAAGCGTGGCATCCTGACCCTTAAGTACCCCATCGAGCACGGCATCGTCACCAACTGGGAC
GACATGGAGAAGATCTGGCACCACACCTTTTACAACGAGCTGCGTGTGGCCCCCGAGGAGCACCCCGTGCTGCTGACGGA
GGCCCCTCTGAACCCCAAGGCCAACCGTGAGAAGATGACCCAGATCATGTTCGAGACGTTCAACACTCCTGCCATGTATG
TGGCCATCCAGGCTGTGCTGTCTCTGTACGCCTCTGGCCGCACCACTGGCATTGTCATGGACTCTGGGGACGGGGTCACC
CACACGGTGCCCATCTACGAGGGGTACGCCCTCCCCCACGCCATCCTGCGTCTGGACCTGGCTGGCCGGGACCTGACAGA
CTACCTCATGAAGATCCTCACGGAACGTGGTTACAGCTTTACCACCACAGCCGAGCGGGAAATTGTGCGTGACATCAAGG
AGAAGCTCTGCTACGTCGCCCTGGACTTCGAGCAGGAGATGGCTACCGCTGCATCCTCCTCCTCCTTGGAGAAGAGCTAT
GAGCTGCCCGATGGTCAGGTGATCACCATTGGCAATGAGCGGTTCCGGTGTCCCGAGGCACTCTTCCAGCCGTCCTTCCT
GGGTATGGAGTCCTGTGGCATCCATGAGACCACCTTCAACTCCATCATGAAGTGTGACGTGGACATCCGAAAGGACCTGT
ATGCCAACACGGTGCTGTCTGGTGGGACCACCATGTACCCTGGCATCGCTGACAGGATGCAGAAGGAGATCACCGCGCTG
GCTCCAAGCACGATGAAGATCAAGATCATTGCTCCTCCCGAGCGCAAGTACTCGGTGTGGATCGGAGGCTCCATCCTGGC
CTCCCTGTCCACCTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGACGAGTCTGGCCCCTCCATTGTCCACCGCAAAT
GCTTCTAA

Library Parental gene expression (RPM)
ERP005899_liver 302 .08 RPM
ERP005899_muscle 2089 .81 RPM
SRP017611_brain 787 .60 RPM
SRP017611_kidney 986 .34 RPM
SRP017611_liver 119 .91 RPM
SRP030211_testis 527 .90 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015238 ortholog_one2one 3 retrogenes
retro_acar_176, retro_acar_199, retro_acar_7,
Callithrix jacchus ENSCJAG00000002885 possible_ortholog 3 retrogenes
retro_cjac_139, retro_cjac_336, retro_cjac_377,
Gallus gallus ENSGALG00000028749 ortholog_one2one 1 retrogene
retro_ggal_6,
Loxodonta africana ENSLAFG00000009167 possible_ortholog 1 retrogene
retro_lafr_116,
Macropus eugenii ENSMEUG00000016247 ortholog_one2one 57 retrogenes
retro_meug_1006, retro_meug_1010, retro_meug_1018, retro_meug_1042, retro_meug_105, retro_meug_1085, retro_meug_1147, retro_meug_1186, retro_meug_1200, retro_meug_1230, retro_meug_1237, retro_meug_1380, retro_meug_1414, retro_meug_1437, retro_meug_1529, retro_meug_1534, retro_meug_1557, retro_meug_1588, retro_meug_1613, retro_meug_1624, retro_meug_1654, retro_meug_1656, retro_meug_1664, retro_meug_1669, retro_meug_1708, retro_meug_1716, retro_meug_1723, retro_meug_1753, retro_meug_1763, retro_meug_18, retro_meug_1935, retro_meug_1969, retro_meug_197, retro_meug_1982, retro_meug_1991, retro_meug_2100, retro_meug_2176, retro_meug_218, retro_meug_270, retro_meug_333, retro_meug_370, retro_meug_379, retro_meug_468, retro_meug_506, retro_meug_556, retro_meug_574, retro_meug_581, retro_meug_61, retro_meug_735, retro_meug_790, retro_meug_833, retro_meug_90, retro_meug_900, retro_meug_915, retro_meug_924, retro_meug_925, retro_meug_959,
Microcebus murinus ENSMICG00000014863 ortholog_one2one 3 retrogenes
retro_mmur_23, retro_mmur_352, retro_mmur_6,
Nomascus leucogenys ENSNLEG00000013385 ortholog_one2one 15 retrogenes
retro_nleu_1008, retro_nleu_1058, retro_nleu_1059, retro_nleu_1150, retro_nleu_1347, retro_nleu_1474, retro_nleu_1729, retro_nleu_2193, retro_nleu_2393, retro_nleu_2574, retro_nleu_2669, retro_nleu_3032, retro_nleu_344, retro_nleu_813, retro_nleu_974,
Nomascus leucogenys ENSNLEG00000015506 possible_ortholog 3 retrogenes
retro_nleu_1525, retro_nleu_1536, retro_nleu_1930,
Otolemur garnettii ENSOGAG00000008040 ortholog_one2one 3 retrogenes
retro_ogar_148, retro_ogar_1808, retro_ogar_2430,
Petromyzon marinus ENSPMAG00000004161 possible_ortholog 1 retrogene
retro_pmar_4,
Pelodiscus sinensis ENSPSIG00000002102 ortholog_one2one 2 retrogenes
retro_psin_25, retro_psin_4,
Rattus norvegicus ENSRNOG00000036701 possible_ortholog 1 retrogene
retro_rnor_715,
Ictidomys tridecemlineatus ENSSTOG00000006868 possible_ortholog 2 retrogenes
retro_itri_1675, retro_itri_531,
Xenopus tropicalis ENSXETG00000025116 possible_ortholog 1 retrogene
retro_xtro_6,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_286 52.61 53.07
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2. retro_btau_903 92.78 99.73
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Download FASTA sequences of all ENSBTAG00000006189 retrocopies