Parental gene:

RAC3, ENSCPOG00000013861

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_76:6417848..6419831(+)


>ENSCPOG00000013861
ATGCAGGCCATCAAGTGCGTGGTGGTTGGTGACGGTGCTGTCGGGAAGACATGCCTACTGATCAGCTATACGACCAACGC
CTTCCCTGGAGAATACATCCCCACTGTTTTTGACAACTATTCAGCCAACGTGATGGTGGACGGGAAGCCTGTCAACCTGG
GGCTATGGGACACTGCTGGGCAGGAGGACTATGACCGGCTGCGGCCACTCTCCTATCCCCAAACTGATGTCTTTCTGATC
TGTTTCTCCTTGGTGAGCCCGGCTTCCTTTGAGAATGTTCGTGCCAAGTGGTACCCAGAGGTACGGCACCACTGCCCCCA
CACGCCAATCCTGTTAGTGGGCACCAAGCTTGACCTTCGTGATGACAAGGACACCATCGAGCGGCTGCGGGACAAGAAGC
TGGCACCTATCACCTACCCACAGGGCTTGGCCATGGCCCGAGAGATTGGCTCTGTCAAATACCTGGAGTGCTCGGCCCTG
ACCCAGCGGGGCCTGAAAACAGTATTCGATGAGGCCATCCGGGCAGTGCTCTGCCCACCTCCTGTGAAAAAGCCAGGCAA
GAAGTGCACAGTCTTCTAG

Library Parental gene expression (RPM)
SRP017611_brain 22 .09 RPM
SRP017611_kidney 4 .92 RPM
SRP017611_liver 2 .31 RPM
SRP040447_lung 34 .63 RPM
SRP040447_skeletal_muscle 1 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017364 ortholog_one2one 1 retrogene
retro_amel_1104,
Callithrix jacchus ENSCJAG00000018194 ortholog_one2one 1 retrogene
retro_cjac_2687,
Cavia porcellus ENSCPOG00000006543 other_paralog 4 retrogenes
retro_cpor_1168, retro_cpor_286, retro_cpor_33, retro_cpor_887,
Echinops telfairi ENSETEG00000012902 ortholog_one2one 3 retrogenes
retro_etel_1565, retro_etel_1645, retro_etel_42,
Macropus eugenii ENSMEUG00000006196 ortholog_one2one 1 retrogene
retro_meug_201,
Otolemur garnettii ENSOGAG00000012467 ortholog_one2one 1 retrogene
retro_ogar_2140,
Procavia capensis ENSPCAG00000009949 ortholog_one2one 1 retrogene
retro_pcap_16,
Pongo abelii ENSPPYG00000008763 ortholog_one2one 2 retrogenes
retro_pabe_1047, retro_pabe_2546,
Tupaia belangeri ENSTBEG00000007272 possible_ortholog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,
Takifugu rubripes ENSTRUG00000016201 possible_ortholog 1 retrogene
retro_trub_15,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_18 70.16 99.48
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Download FASTA sequences of all ENSCPOG00000013861 retrocopies