Parental gene:

RAC3, ENSPPYG00000008763

Aliases:None
Description:ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) [Source:HGNC Symbol;Acc:9803]
Organism:Orangutan (Pongo abelii)
Coordinates:17:72125776..72128790(+)


>ENSPPYG00000008763
ATACAGGCCATCAAGTGCGTGGTGGTCGGCGACGGCGCCGTGGGGAAGACATGCTTGCTGATCAGCTACACGACCAACGC
CTTCCCCGGAGAGTACATCCCCACCGTTTTTGACAACTATTCTGCCAACGTGATGGTGGACGGGAAACCGGTCAACCTGG
GGCTGTGGGACACGGCGGGTCAGGAGGACTACGATCGGCTGCGGCCACTCTCCTATCCCCAGACTGATGTCTTTCTGATC
TGCTTCTCCCTGGTGAGCCCCGCCTCCTTCGAGAACGTTCGTGCCAAGTGGTACCCGGAGGTGCGGCACCACTGCCCCCA
GACGCCCATCCTCCTGGTGGGCACCAAGCTGGACCTCCGCGACGACAAGGACACCATTGAGCGGCTGCGGGACAAGAAGC
TGGCGCCCATCACCTACCCACAGGGCCTGGCCATGGCCCGGGAGATCGGCTCTGTGAAATACCTGGAGTGCTCAGCCCTG
ACCCAGCGGGGCCTGAAGACAGTGTTTGACGAGGCAATCCGCGCGGTGCTCTGCCCGCCCCCCGTGAAGAAGCCGGGGAA
GAAGTGCACTGTCTTCTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 13 .16 RPM
SRP007412_cerebellum 8 .51 RPM
SRP007412_heart 0 .24 RPM
SRP007412_kidney 7 .06 RPM
SRP007412_liver 1 .38 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017364 ortholog_one2one 1 retrogene
retro_amel_1104,
Callithrix jacchus ENSCJAG00000018194 ortholog_one2one 1 retrogene
retro_cjac_2687,
Cavia porcellus ENSCPOG00000013861 ortholog_one2one 1 retrogene
retro_cpor_18,
Echinops telfairi ENSETEG00000012902 ortholog_one2one 3 retrogenes
retro_etel_1565, retro_etel_1645, retro_etel_42,
Macropus eugenii ENSMEUG00000006196 ortholog_one2one 1 retrogene
retro_meug_201,
Otolemur garnettii ENSOGAG00000012467 ortholog_one2one 1 retrogene
retro_ogar_2140,
Procavia capensis ENSPCAG00000009949 ortholog_one2one 1 retrogene
retro_pcap_16,
Pongo abelii ENSPPYG00000001755 other_paralog 6 retrogenes
retro_pabe_2240, retro_pabe_2461, retro_pabe_2801, retro_pabe_3215, retro_pabe_3239, retro_pabe_3295,
Pongo abelii ENSPPYG00000011791 within_species_paralog 3 retrogenes
retro_pabe_1591, retro_pabe_21, retro_pabe_3818,
Pongo abelii ENSPPYG00000012439 other_paralog 2 retrogenes
retro_pabe_1107, retro_pabe_2195,
Tupaia belangeri ENSTBEG00000007272 possible_ortholog 4 retrogenes
retro_tbel_1796, retro_tbel_2564, retro_tbel_4296, retro_tbel_9,
Takifugu rubripes ENSTRUG00000016201 possible_ortholog 1 retrogene
retro_trub_15,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_1047 71.35 98.44
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2. retro_pabe_2546 76.84 98.44
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Download FASTA sequences of all ENSPPYG00000008763 retrocopies