Parental gene:

SNRPG, ENSECAG00000019989

Aliases:None
Description:small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163]
Organism:Horse (Equus caballus)
Coordinates:15:32262754..32271269(+)


>ENSECAG00000019989
ATGAGCAAAGCTCACCCTCCTGAGTTGAAAAAATTTATGGACAAGAAGTTATCATTGAAATTAAATGGTGGCAGACATGT
CCAAGGAATATTGCGGGGATTTGATCCCTTTATGAATCTTGTGATAGACGAATGTGTGGAGATGGCAACTAGTGGGCAAC
AGAACAATATTGGAATGGTGGTAATACGAGGAAATAGTATCATCATGTTAGAAGCCTTGGAACGAGTATAA

Library Parental gene expression (RPM)
SRP021940_synovial_membrane 17 .05 RPM
SRP021940_embryo 36 .95 RPM
SRP021940_cerebellum 13 .87 RPM
SRP021940_testis 20 .14 RPM
SRP021940_placental_villous 20 .54 RPM
SRP021940_articular_cartilage 10 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032595 ortholog_one2one 14 retrogenes
Callithrix jacchus ENSCJAG00000019313 possible_ortholog 18 retrogenes
Cavia porcellus ENSCPOG00000025022 ortholog_one2one 6 retrogenes
Felis catus ENSFCAG00000008118 possible_ortholog 8 retrogenes
Homo sapiens ENSG00000143977 ortholog_one2one 12 retrogenes
Loxodonta africana ENSLAFG00000002301 ortholog_one2one 3 retrogenes
Microcebus murinus ENSMICG00000015369 ortholog_one2one 10 retrogenes
Myotis lucifugus ENSMLUG00000026490 possible_ortholog 3 retrogenes
Macaca mulatta ENSMMUG00000007961 possible_ortholog 3 retrogenes
Monodelphis domestica ENSMODG00000011528 ortholog_one2one 1 retrogene
Mustela putorius furo ENSMPUG00000007221 ortholog_one2one 2 retrogenes
Mus musculus ENSMUSG00000057278 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000010182 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000011214 possible_ortholog 2 retrogenes
Otolemur garnettii ENSOGAG00000015300 ortholog_one2one 13 retrogenes
Pongo abelii ENSPPYG00000012324 ortholog_one2one 14 retrogenes
Pan troglodytes ENSPTRG00000012029 ortholog_one2one 11 retrogenes
Pteropus vampyrus ENSPVAG00000004855 ortholog_one2one 3 retrogenes
Rattus norvegicus ENSRNOG00000016507 ortholog_one2many 1 retrogene
Ictidomys tridecemlineatus ENSSTOG00000008654 ortholog_one2many 11 retrogenes
Tupaia belangeri ENSTBEG00000017381 possible_ortholog 66 retrogenes
Tarsius syrichta ENSTSYG00000005729 ortholog_one2one 11 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_197 82.67 98.68
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2. retro_ecab_376 76.62 100.00
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3. retro_ecab_410 84.00 98.68
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4. retro_ecab_693 71.43 100.00
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5. retro_ecab_1080 88.16 100.00
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Download FASTA sequences of all ENSECAG00000019989 retrocopies