RetrogeneDB ID: | retro_itri_1260 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393416.1:1654750..1654971(-) | ||
Located in intron of: | ENSSTOG00000007649 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000008654 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.33 % |
Parental protein coverage: | 97.37 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFD-PFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIM |
MSKAHPPELKKF.DKKLSLKLNGGR.VQ.IL.GF..PFMNL.IDEC..M..S.Q.NN.GMVVI.GNSIIM | |
Retrocopy | MSKAHPPELKKFTDKKLSLKLNGGRQVQRILQGFT<PFMNLMIDECEKMGISEQ*NNTGMVVIAGNSIIM |
Parental | LEALE |
L.A.E | |
Retrocopy | L*AFE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |