Parental gene: | ARPC3, ENSG00000111229 |
| Aliases: | ARPC3, ARC21, p21-Arc |
| Description: | actin related protein 2/3 complex, subunit 3, 21kDa [Source:HGNC Symbol;Acc:706] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 12:110872629..110888227(-) |
>ENSG00000111229
ATGCCGGCTTACCACTCTTCTCTCATGGATCCTGATACCAAACTCATCGGAAACATGGCACTGTTGCCTATCAGAAGTCA
ATTCAAAGGACCTGCCCCCAGAGAGACAAAAGATACAGATATTGTGGATGAAGCCATCTATTACTTCAAGGCCAATGTCT
TCTTCAAAAACTATGAAATTAAGAATGAAGCTGATAGGACCTTGATATATATAACTCTCTACATTTCTGAATGTCTGAAG
AAACTGCAAAAGTGCAATTCCAAAAGCCAAGGTGAGAAAGAAATGTATACGCTGGGAATCACTAATTTTCCCATTCCTGG
AGAGCCTGGTTTTCCACTTAACGCAATTTATGCCAAACCTGCAAACAAACAGGAAGATGAAGTGATGAGAGCCTATTTAC
AACAGCTAAGGCAAGAGACTGGACTGAGACTTTGTGAGAAAGTTTTCGACCCTCAGAATGATAAACCCAGCAAGTGGTGG
ACTTGCTTTGTGAAGAGACAGTTCATGAACAAGAGTCTTTCAGGACCTGGACAGTGA
ATGCCGGCTTACCACTCTTCTCTCATGGATCCTGATACCAAACTCATCGGAAACATGGCACTGTTGCCTATCAGAAGTCA
ATTCAAAGGACCTGCCCCCAGAGAGACAAAAGATACAGATATTGTGGATGAAGCCATCTATTACTTCAAGGCCAATGTCT
TCTTCAAAAACTATGAAATTAAGAATGAAGCTGATAGGACCTTGATATATATAACTCTCTACATTTCTGAATGTCTGAAG
AAACTGCAAAAGTGCAATTCCAAAAGCCAAGGTGAGAAAGAAATGTATACGCTGGGAATCACTAATTTTCCCATTCCTGG
AGAGCCTGGTTTTCCACTTAACGCAATTTATGCCAAACCTGCAAACAAACAGGAAGATGAAGTGATGAGAGCCTATTTAC
AACAGCTAAGGCAAGAGACTGGACTGAGACTTTGTGAGAAAGTTTTCGACCCTCAGAATGATAAACCCAGCAAGTGGTGG
ACTTGCTTTGTGAAGAGACAGTTCATGAACAAGAGTCTTTCAGGACCTGGACAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 78 .03 RPM |
| bodymap2_lung | 150 .05 RPM |
| bodymap2_breast | 65 .31 RPM |
| bodymap2_adipose | 84 .30 RPM |
| bodymap2_adrenal | 161 .73 RPM |
| bodymap2_skeletal_muscle | 36 .03 RPM |
| bodymap2_thyroid | 80 .77 RPM |
| bodymap2_prostate | 107 .37 RPM |
| bodymap2_colon | 77 .56 RPM |
| bodymap2_testis | 84 .03 RPM |
| bodymap2_brain | 52 .06 RPM |
| bodymap2_heart | 45 .84 RPM |
| bodymap2_white_blood_cells | 397 .42 RPM |
| bodymap2_lymph_node | 137 .18 RPM |
| bodymap2_ovary | 62 .50 RPM |
| bodymap2_kidney | 118 .87 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008456 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000009360 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000006992 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000004132 | possible_ortholog | 2 retrogenes | |
| Microcebus murinus | ENSMICG00000005485 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000011628 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000002151 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000011908 | possible_ortholog | 1 retrogene | |
| Oreochromis niloticus | ENSONIG00000003785 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000014805 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000009821 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_303 | 88.71 | 69.66 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_892 | 88.46 | 58.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_918 | 91.85 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_2431 | 93.26 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_hsap_3425 | 93.30 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000111229 retrocopies