Parental gene:

ARPC3, ENSSSCG00000009821

Aliases:None
Description:Sus scrofa actin related protein 2/3 complex, subunit 3, 21kDa (ARPC3), mRNA. [Source:RefSeq mRNA;Acc:NM_001185135]
Organism:Pig (Sus scrofa)
Coordinates:14:33733116..33784423(+)


>ENSSSCG00000009821
ATGCCGGCTTATCACTCTTCCCTCATGGACCCCGACACCAAACTCATTGGAAACATGGCATTGCTGCCTATCAGGAGTCA
GTTCAAAGGACCTGCCCCTAGAGAAACAAAAGATACAGATATTGTGGATGAAGCTATCTATTACTTCAAGGCCAATGTCT
TCTTCAAAAACTATGAAATTAAGAATGAAGCTGATAGGACCTTGATATATATAACTCTCTACATTTCTGAGTGTCTAAAG
AAACTCCAAAAGTGCAATTCTAAAAGCCAAGGCGAGAAGGAAATGTATACATTGGGGATCACTAATTTTCCCATTCCTGG
AGAGCCTGGTTTTCCACTTAATGCAATTTATGCCAAACCTGCAAACAAACAGGAAGATGAAGTGATGAGGGCCTATTTAC
AACAGCTGAGGCAAGAGACTGGACTGAGACTTTGTGAAAAAGTTTTTGACCCTCAGAATGATAAACCCAGCAAGTGGTGG
ACTTGCTTTGTGAAGAGACAATTCATGAACAAGAGTCTTTCAGGACCCGGACAGTAA

Library Parental gene expression (RPM)
SRP014902_placenta 44 .73 RPM
SRP014902_testis 32 .11 RPM
SRP018856_adipose 49 .98 RPM
SRP018288_kidney 106 .48 RPM
SRP018288_lung 125 .96 RPM
SRP018288_liver 52 .13 RPM
SRP018288_heart 40 .76 RPM
SRP035408_liver 117 .95 RPM
SRP035408_brain 259 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008456 possible_ortholog 1 retrogene
retro_cfam_11,
Callithrix jacchus ENSCJAG00000009360 ortholog_one2many 1 retrogene
retro_cjac_242,
Echinops telfairi ENSETEG00000006992 ortholog_one2one 2 retrogenes
retro_etel_116, retro_etel_1323,
Felis catus ENSFCAG00000004132 possible_ortholog 2 retrogenes
retro_fcat_1048, retro_fcat_73,
Homo sapiens ENSG00000111229 ortholog_one2one 5 retrogenes
retro_hsap_2431, retro_hsap_303, retro_hsap_3425, retro_hsap_892, retro_hsap_918,
Microcebus murinus ENSMICG00000005485 ortholog_one2one 2 retrogenes
retro_mmur_1009, retro_mmur_1507,
Macaca mulatta ENSMMUG00000006492 ortholog_one2one 3 retrogenes
retro_mmul_1105, retro_mmul_1174, retro_mmul_543,
Monodelphis domestica ENSMODG00000011628 ortholog_one2many 1 retrogene
retro_mdom_71,
Mustela putorius furo ENSMPUG00000002151 ortholog_one2one 2 retrogenes
retro_mputfur_1346, retro_mputfur_1540,
Oryctolagus cuniculus ENSOCUG00000011908 possible_ortholog 1 retrogene
retro_ocun_1252,
Oreochromis niloticus ENSONIG00000003785 ortholog_one2many 1 retrogene
retro_onil_18,
Sarcophilus harrisii ENSSHAG00000014805 ortholog_one2one 3 retrogenes
retro_shar_144, retro_shar_439, retro_shar_576,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_177 82.86 58.43
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Download FASTA sequences of all ENSSSCG00000009821 retrocopies