RetrogeneDB ID: | retro_shar_576 | ||
Retrocopylocation | Organism: | Tasmanian devil (Sarcophilus harrisii) | |
Coordinates: | GL850326.1:45746..46077(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ARPC3 | ||
Ensembl ID: | ENSSHAG00000014805 | ||
Aliases: | None | ||
Description: | actin related protein 2/3 complex, subunit 3, 21kDa [Source:HGNC Symbol;Acc:706] |
Percent Identity: | 69.64 % |
Parental protein coverage: | 62.36 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | VDEAIYYFKANVFFKNYEIKNEADRTLIYITLYISECLKKLQKCNSKSQGEKEMYTLGITNFPIPGEPGF |
.D.A..Y.KA.VF.K.YEI.N.ADRTLIYITL.I..CLKKLQ.CNSK.QGEKE.Y.LGI.NFPIPG...F | |
Retrocopy | MD*AVFYCKAKVFSKFYEI-NKADRTLIYITLCIFKCLKKLQMCNSKIQGEKETYKLGIINFPIPGDLRF |
Parental | PLNAIYAKPANKQEDEVMR-AYLQQLRQETGLRLCEKVFDPQ |
..NAIY..PANKQE.EVMR.....QL.QET.LRLCEKVF.PQ | |
Retrocopy | SFNAIYV*PANKQEGEVMR>SLFKQLLQETDLRLCEKVFGPQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |