Parental gene: | PTP4A2, ENSG00000184007 |
| Aliases: | PTP4A2, HH13, HH7-2, HU-PP-1, OV-1, PRL-2, PRL2, PTP4A, PTPCAAX2, ptp-IV1a, ptp-IV1b |
| Description: | protein tyrosine phosphatase type IVA, member 2 [Source:HGNC Symbol;Acc:9635] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:32372021..32410457(-) |
>ENSG00000184007
ATGAACCGTCCAGCCCCTGTGGAGATCTCCTATGAGAACATGCGTTTTCTGATAACTCACAACCCTACCAATGCTACTCT
CAACAAGTTCACAGAGGAACTTAAGAAGTATGGAGTGACGACTTTGGTTCGAGTTTGTGATGCTACATATGATAAAGCTC
CAGTTGAAAAAGAAGGAATCCACGTTCTAGATTGGCCATTTGATGATGGAGCTCCACCCCCTAATCAGATAGTAGATGAT
TGGTTAAACCTGTTAAAAACCAAATTTCGTGAAGAGCCAGGTTGCTGTGTTGCAGTGCATTGTGTTGCAGGATTGGGAAG
GGCACCTGTGCTGGTTGCACTTGCTTTGATTGAATGTGGAATGAAGTACGAAGATGCAGTTCAGTTTATAAGACAAAAAA
GAAGGGGAGCGTTCAATTCCAAACAGCTGCTTTATTTGGAGAAATACCGACCTAAGATGCGATTACGCTTCAGAGATACC
AATGGGCATTGCTGTGTTCAGTAG
ATGAACCGTCCAGCCCCTGTGGAGATCTCCTATGAGAACATGCGTTTTCTGATAACTCACAACCCTACCAATGCTACTCT
CAACAAGTTCACAGAGGAACTTAAGAAGTATGGAGTGACGACTTTGGTTCGAGTTTGTGATGCTACATATGATAAAGCTC
CAGTTGAAAAAGAAGGAATCCACGTTCTAGATTGGCCATTTGATGATGGAGCTCCACCCCCTAATCAGATAGTAGATGAT
TGGTTAAACCTGTTAAAAACCAAATTTCGTGAAGAGCCAGGTTGCTGTGTTGCAGTGCATTGTGTTGCAGGATTGGGAAG
GGCACCTGTGCTGGTTGCACTTGCTTTGATTGAATGTGGAATGAAGTACGAAGATGCAGTTCAGTTTATAAGACAAAAAA
GAAGGGGAGCGTTCAATTCCAAACAGCTGCTTTATTTGGAGAAATACCGACCTAAGATGCGATTACGCTTCAGAGATACC
AATGGGCATTGCTGTGTTCAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 104 .10 RPM |
| bodymap2_lung | 295 .96 RPM |
| bodymap2_breast | 434 .95 RPM |
| bodymap2_adipose | 574 .21 RPM |
| bodymap2_adrenal | 318 .20 RPM |
| bodymap2_skeletal_muscle | 538 .11 RPM |
| bodymap2_thyroid | 390 .94 RPM |
| bodymap2_prostate | 332 .86 RPM |
| bodymap2_colon | 272 .98 RPM |
| bodymap2_testis | 264 .30 RPM |
| bodymap2_brain | 334 .61 RPM |
| bodymap2_heart | 189 .34 RPM |
| bodymap2_white_blood_cells | 654 .97 RPM |
| bodymap2_lymph_node | 311 .00 RPM |
| bodymap2_ovary | 426 .92 RPM |
| bodymap2_kidney | 186 .85 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000039121 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006539 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000112245 | within_species_paralog | 5 retrogenes | |
| Mus musculus | ENSMUSG00000028788 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002137 | ortholog_one2one | 3 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000002060 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000029603 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000001606 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000050044 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000003605 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000002775 | ortholog_one2one | 2 retrogenes | |
| Tupaia belangeri | ENSTBEG00000006790 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016571 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_944 | 91.02 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1069 | 71.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1754 | 92.47 | 87.43 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_4331 | 71.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000184007 retrocopies