Parental gene: | PTP4A1, ENSG00000112245 |
Aliases: | PTP4A1, HH72, PRL-1, PRL1, PTP(CAAX1), PTPCAAX1 |
Description: | protein tyrosine phosphatase type IVA, member 1 [Source:HGNC Symbol;Acc:9634] |
Organism: | Human (Homo sapiens) |
Coordinates: | 6:64231665..64293492(+) |
Library | Parental gene expression (RPM) |
---|---|
bodymap2_liver | 559 .50 RPM |
bodymap2_lung | 237 .75 RPM |
bodymap2_breast | 173 .45 RPM |
bodymap2_adipose | 154 .47 RPM |
bodymap2_adrenal | 89 .27 RPM |
bodymap2_skeletal_muscle | 1088 .60 RPM |
bodymap2_thyroid | 234 .26 RPM |
bodymap2_prostate | 448 .99 RPM |
bodymap2_colon | 228 .41 RPM |
bodymap2_testis | 127 .47 RPM |
bodymap2_brain | 181 .05 RPM |
bodymap2_heart | 79 .53 RPM |
bodymap2_white_blood_cells | 140 .87 RPM |
bodymap2_lymph_node | 95 .53 RPM |
bodymap2_ovary | 290 .37 RPM |
bodymap2_kidney | 185 .48 RPM |
Species | Parental gene accession | Homology type | Retrogenes number | |
---|---|---|---|---|
Ailuropoda melanoleuca | ENSAMEG00000002438 | ortholog_one2one | 3 retrogenes | |
Bos taurus | ENSBTAG00000002275 | ortholog_one2one | 3 retrogenes | |
Canis familiaris | ENSCAFG00000002490 | ortholog_one2one | 3 retrogenes | |
Callithrix jacchus | ENSCJAG00000001743 | ortholog_one2one | 3 retrogenes | |
Dipodomys ordii | ENSDORG00000009960 | ortholog_one2one | 6 retrogenes | |
Erinaceus europaeus | ENSEEUG00000006477 | ortholog_one2one | 3 retrogenes | |
Echinops telfairi | ENSETEG00000008183 | ortholog_one2one | 6 retrogenes | |
Felis catus | ENSFCAG00000001199 | ortholog_one2one | 3 retrogenes | |
Homo sapiens | ENSG00000184007 | within_species_paralog | 4 retrogenes | |
Gorilla gorilla | ENSGGOG00000022521 | ortholog_one2one | 7 retrogenes | |
Latimeria chalumnae | ENSLACG00000007183 | ortholog_one2one | 1 retrogene | |
Loxodonta africana | ENSLAFG00000006572 | ortholog_one2one | 8 retrogenes | |
Myotis lucifugus | ENSMLUG00000001162 | ortholog_one2many | 1 retrogene | |
Macaca mulatta | ENSMMUG00000002777 | possible_ortholog | 1 retrogene | |
Monodelphis domestica | ENSMODG00000018701 | ortholog_one2one | 5 retrogenes | |
Mustela putorius furo | ENSMPUG00000003118 | ortholog_one2one | 1 retrogene | |
Mus musculus | ENSMUSG00000026064 | ortholog_one2one | 10 retrogenes | |
Nomascus leucogenys | ENSNLEG00000000440 | ortholog_one2one | 6 retrogenes | |
Oryctolagus cuniculus | ENSOCUG00000006311 | ortholog_one2one | 4 retrogenes | |
Pongo abelii | ENSPPYG00000016743 | ortholog_one2one | 5 retrogenes | |
Pan troglodytes | ENSPTRG00000018314 | ortholog_one2one | 4 retrogenes | |
Rattus norvegicus | ENSRNOG00000011771 | ortholog_one2many | 4 retrogenes | |
Rattus norvegicus | ENSRNOG00000046370 | ortholog_one2many | 4 retrogenes | |
Tupaia belangeri | ENSTBEG00000009956 | possible_ortholog | 14 retrogenes | |
Tarsius syrichta | ENSTSYG00000004632 | ortholog_one2one | 2 retrogenes | |
Tursiops truncatus | ENSTTRG00000004129 | ortholog_one2one | 6 retrogenes |
# | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
---|---|---|---|---|---|---|
1. | retro_hsap_479 | 85.38 | 98.84 | Please wait, loading | Please wait, loading | Please wait, loading |
2. | retro_hsap_807 | 76.47 | 58.38 | Please wait, loading | Please wait, loading | Please wait, loading |
3. | retro_hsap_2171 | 81.53 | 89.02 | Please wait, loading | Please wait, loading | Please wait, loading |
4. | retro_hsap_3212 | 83.23 | 95.38 | Please wait, loading | Please wait, loading | Please wait, loading |
5. | retro_hsap_4798 | 66.09 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |