Parental gene:

TPRKB, ENSGGOG00000009062

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:2a:75115803..75124112(-)


>ENSGGOG00000009062
ATGCAGTTAACACATCAGCTGGACCTATTTCCCGAATGCAGGGTAACCCTTCTGTTATTTAAAGATGTAAAAAATGCGGG
AGACTTGAGAAGAAAGGCCATGGAAGGCACCATCGATGGATCACTGATAAATCCTACAGTGTTTCACTCTTGTTGCCCAG
GCTGGAGTGCAATGGCGCGATCTATTGTTGATCCATTTCAGATACTTGTGGCAGCAAACAAAGCAGTTCACCTCTACAAA
CTGGGAAAAATGAAGACAAGAACTCTATCTACTGAAATTATTTTCAACCTTTCCCCAAATAACAATATTTCAGAGGCTTT
GAAAAAATTTGGTATCTCAGCAAATGACACTTCAATTCTAATTGTTTACATTGAAGAGGGAGAAAAACAAATAAATCAAG
AATACCTAATATCTCAAGTAGAAGGTCATCAGGTTTCTCTGAAAAATCTTCCTGAAATAATGAATATTACAGAAGTCAAA
AAGATATATAAACTCTCTTCACAAGAAGAAAGTATTGGGACATTATTGGATGGTATCATTTGTAGAATGTCAACAAAAGA
TGTTTTGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 3 .45 RPM
SRP007412_cerebellum 5 .08 RPM
SRP007412_heart 1 .31 RPM
SRP007412_kidney 9 .69 RPM
SRP007412_liver 6 .67 RPM
SRP007412_testis 15 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012021 ortholog_one2many 1 retrogene
retro_chof_35,
Callithrix jacchus ENSCJAG00000004162 ortholog_one2one 3 retrogenes
retro_cjac_1999, retro_cjac_2867, retro_cjac_3065,
Homo sapiens ENSG00000144034 ortholog_one2one 1 retrogene
retro_hsap_552,
Macaca mulatta ENSMMUG00000030805 ortholog_one2many 1 retrogene
retro_mmul_1571,
Monodelphis domestica ENSMODG00000016950 ortholog_one2one 2 retrogenes
retro_mdom_1264, retro_mdom_465,
Nomascus leucogenys ENSNLEG00000000300 ortholog_one2one 2 retrogenes
retro_nleu_2021, retro_nleu_957,
Oryctolagus cuniculus ENSOCUG00000016251 ortholog_one2one 2 retrogenes
retro_ocun_519, retro_ocun_769,
Otolemur garnettii ENSOGAG00000032893 ortholog_one2one 2 retrogenes
retro_ogar_523, retro_ogar_849,
Pongo abelii ENSPPYG00000012292 ortholog_one2one 1 retrogene
retro_pabe_509,
Pteropus vampyrus ENSPVAG00000012419 ortholog_one2one 1 retrogene
retro_pvam_75,
Ictidomys tridecemlineatus ENSSTOG00000016406 ortholog_one2one 4 retrogenes
retro_itri_1613, retro_itri_453, retro_itri_918, retro_itri_919,
Tupaia belangeri ENSTBEG00000014584 ortholog_one2many 2 retrogenes
retro_tbel_33, retro_tbel_3630,
Vicugna pacos ENSVPAG00000007934 ortholog_one2one 2 retrogenes
retro_vpac_149, retro_vpac_192,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_501 78.71 88.00
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Download FASTA sequences of all ENSGGOG00000009062 retrocopies