Parental gene:

TPRKB, ENSMMUG00000030805

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:13:73966612..73974336(-)


>ENSMMUG00000030805
ATGCAGTTAACACATCAGCTGGACCTATTTCCTGAATGCAGGGTAACCCTTCTGTTATTTAAAGATGTAAAAAATGCGGG
AGACTTGAGAAGAAAGGCCATGGAAGGCACCATCGATGGATCACTGATAAATCCTACAGTGATTGTCGATCCATTTCAGA
TACTTGTGGCAGCAAACAAAGCAGTTCACCTCTACAAACTGGGAAAAATGAAGACAAGAACTCTATCTACTGAAATTATT
TTCAACCTTTCCCCAAATAACAATATTTCAGAGGCTTTGAAAAAATTTGGTATCTCAGCAAATGACACTTCAATTCTAAT
TGTTTACATTGAAGAGGGAGAAAAACAAATAAATCAAGAATACCTAATATCTCAAGTGGAAGGTCATCAGGTTTCTCTGA
AAAGTCTTCCTGAGATAACAAATATTACGGAAGTCCAAAAGATATATAAACTCTCTTCACAAGAAGAAAGTATTGGGACA
TTATTGGATGGTATCATTTGTAGAATGTCAACAAAAGATGTTTTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 5 .27 RPM
SRP007412_brain_prefrontal_cortex 2 .62 RPM
SRP007412_cerebellum 6 .52 RPM
SRP007412_heart 4 .12 RPM
SRP007412_kidney 4 .23 RPM
SRP007412_liver 1 .39 RPM
SRP007412_testis 9 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000012021 ortholog_many2many 1 retrogene
retro_chof_35,
Callithrix jacchus ENSCJAG00000004162 ortholog_one2many 3 retrogenes
retro_cjac_1999, retro_cjac_2867, retro_cjac_3065,
Homo sapiens ENSG00000144034 ortholog_one2many 1 retrogene
retro_hsap_552,
Gorilla gorilla ENSGGOG00000009062 ortholog_one2many 1 retrogene
retro_ggor_501,
Monodelphis domestica ENSMODG00000016950 ortholog_one2many 2 retrogenes
retro_mdom_1264, retro_mdom_465,
Nomascus leucogenys ENSNLEG00000000300 ortholog_one2many 2 retrogenes
retro_nleu_2021, retro_nleu_957,
Oryctolagus cuniculus ENSOCUG00000016251 ortholog_one2many 2 retrogenes
retro_ocun_519, retro_ocun_769,
Otolemur garnettii ENSOGAG00000032893 ortholog_one2many 2 retrogenes
retro_ogar_523, retro_ogar_849,
Pongo abelii ENSPPYG00000012292 ortholog_one2many 1 retrogene
retro_pabe_509,
Pteropus vampyrus ENSPVAG00000012419 ortholog_one2many 1 retrogene
retro_pvam_75,
Ictidomys tridecemlineatus ENSSTOG00000016406 ortholog_one2many 4 retrogenes
retro_itri_1613, retro_itri_453, retro_itri_918, retro_itri_919,
Tupaia belangeri ENSTBEG00000014584 ortholog_many2many 2 retrogenes
retro_tbel_33, retro_tbel_3630,
Vicugna pacos ENSVPAG00000007934 ortholog_one2many 2 retrogenes
retro_vpac_149, retro_vpac_192,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1571 56.69 71.43
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Download FASTA sequences of all ENSMMUG00000030805 retrocopies