Parental gene: | PDAP1, ENSGGOG00000025196 |
| Aliases: | None |
| Description: | None |
| Organism: | Gorilla (Gorilla gorilla) |
| Coordinates: | 7:96858067..96868040(-) |
>ENSGGOG00000025196
CGGGTCTCTGCAGGAAGAAAGGGAGGCCACAAAGGCCGGGCGAGGCAGTATACAAGCCCTGAGGAGATCGACGCGCAGCT
GCAGGCTGAGAAGCAGAAGGCCAGGGAAGAAGAGGAGCAAAAAGAAGGTGGAGATGGGGCTGCAGGTGACCCCAAAAAGG
AGAAGAAATCTCTAGACTCAGATGAGAGTGAGGATGAAGAAGATGACTACCAGCAAAAGCGCAAAGGTGTTGAAGGGCTC
ATCGACATCGAGAACCCCAACCGGGTGGCACAGACAACCAAAAAGGTCACACAACTGGATCTGGACGGGCCAAAGGAGCT
TTCGAGGAGAGAACGAGAAGAGATTGAGAAGCAGAAGGCAAAAGAGCGTTACATGAAAATGCACTTGGCCGGGAAGACAG
AGCAAGCCAAGGCTGACCTGGCCCGGCTGGCCATCATCCGGAAACAGCGGGAGGAGGCTGCCCGGAAGAAGGAAGAGGAA
AGGAAAGCAAAAGACGATGCCACATTGTCAGGAAAACGAATGCAGTCACTCTCCCTGAATAAGTAA
CGGGTCTCTGCAGGAAGAAAGGGAGGCCACAAAGGCCGGGCGAGGCAGTATACAAGCCCTGAGGAGATCGACGCGCAGCT
GCAGGCTGAGAAGCAGAAGGCCAGGGAAGAAGAGGAGCAAAAAGAAGGTGGAGATGGGGCTGCAGGTGACCCCAAAAAGG
AGAAGAAATCTCTAGACTCAGATGAGAGTGAGGATGAAGAAGATGACTACCAGCAAAAGCGCAAAGGTGTTGAAGGGCTC
ATCGACATCGAGAACCCCAACCGGGTGGCACAGACAACCAAAAAGGTCACACAACTGGATCTGGACGGGCCAAAGGAGCT
TTCGAGGAGAGAACGAGAAGAGATTGAGAAGCAGAAGGCAAAAGAGCGTTACATGAAAATGCACTTGGCCGGGAAGACAG
AGCAAGCCAAGGCTGACCTGGCCCGGCTGGCCATCATCCGGAAACAGCGGGAGGAGGCTGCCCGGAAGAAGGAAGAGGAA
AGGAAAGCAAAAGACGATGCCACATTGTCAGGAAAACGAATGCAGTCACTCTCCCTGAATAAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 118 .73 RPM |
| SRP007412_cerebellum | 80 .18 RPM |
| SRP007412_heart | 46 .78 RPM |
| SRP007412_kidney | 60 .35 RPM |
| SRP007412_liver | 35 .35 RPM |
| SRP007412_testis | 85 .57 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015838 | ortholog_one2one | 2 retrogenes | |
| Equus caballus | ENSECAG00000024426 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009926 | ortholog_one2one | 1 retrogene | |
| Felis catus | ENSFCAG00000015067 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000106244 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000001460 | ortholog_one2one | 2 retrogenes | |
| Mus musculus | ENSMUSG00000029623 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011017 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000010874 | ortholog_one2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000013615 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000017375 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000041711 | ortholog_one2one | 4 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000001679 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000010152 | ortholog_one2one | 5 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003004 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ggor_837 | 92.74 | 97.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ggor_1776 | 55.08 | 64.64 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ggor_1778 | 52.55 | 71.82 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ggor_2179 | 89.39 | 97.79 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ggor_2371 | 87.57 | 97.79 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSGGOG00000025196 retrocopies