Parental gene:

MMU.1062, ENSMMUG00000001340

Aliases:None
Description:ribosomal protein L32 [Source:RefSeq peptide;Acc:NP_001180502]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:2:48204363..48209796(+)


>ENSMMUG00000001340
ATGGCCGCCCTCAGACCCCTTGTGAAGCCCAAGATCGTCAAAAAAAGAACCAAGAAGTTCATCCGGCACCAGTCAGACCG
ATATGTCAAAATTAAGCGTAACTGGCGGAAACCCAGAGGCATTGACAACAGGGTTCGTAGAAGATTCAAGGGCCAGATCT
TGATGCCCAACATTGGTTATGGGAGCAACAAAAAAACAAAGCACATGCTGCCCAGTGGCTTCCGGAAGTTCCTGGTCCAC
AACGTCAAGGAGTTGGAAGTGCTGCTGATGTGCAACAAATCTTACTGTGCCGAGATTGCTCACAATGTTTCTTCCAAGAA
CCGCAAAGCCATCGTGGAAAGAGCTGCCCAGCTGGCCATCAGAGTCACCAACCCCAACGCCAGGCTGCGCAGTGAAGAAA
ATGAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 44 .15 RPM
SRP007412_brain_prefrontal_cortex 129 .94 RPM
SRP007412_cerebellum 26 .22 RPM
SRP007412_heart 42 .52 RPM
SRP007412_kidney 31 .45 RPM
SRP007412_liver 46 .63 RPM
SRP007412_testis 10 .06 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014763 ortholog_one2many 3 retrogenes
retro_acar_104, retro_acar_125, retro_acar_67,
Ailuropoda melanoleuca ENSAMEG00000004583 possible_ortholog 26 retrogenes
retro_amel_1004, retro_amel_1041, retro_amel_1059, retro_amel_112, retro_amel_1274, retro_amel_1284, retro_amel_13, retro_amel_1394, retro_amel_1450, retro_amel_150, retro_amel_1651, retro_amel_168, retro_amel_1766, retro_amel_1827, retro_amel_1897, retro_amel_274, retro_amel_275, retro_amel_44, retro_amel_573, retro_amel_658, retro_amel_71, retro_amel_776, retro_amel_781, retro_amel_871, retro_amel_892, retro_amel_923,
Bos taurus ENSBTAG00000015283 possible_ortholog 10 retrogenes
retro_btau_1102, retro_btau_1391, retro_btau_1568, retro_btau_1645, retro_btau_1728, retro_btau_1764, retro_btau_377, retro_btau_623, retro_btau_631, retro_btau_654,
Choloepus hoffmanni ENSCHOG00000013534 possible_ortholog 27 retrogenes
retro_chof_1131, retro_chof_1164, retro_chof_1181, retro_chof_1234, retro_chof_1461, retro_chof_152, retro_chof_1821, retro_chof_1957, retro_chof_2022, retro_chof_205, retro_chof_2090, retro_chof_2146, retro_chof_2242, retro_chof_2265, retro_chof_2301, retro_chof_2410, retro_chof_2509, retro_chof_2527, retro_chof_2606, retro_chof_276, retro_chof_286, retro_chof_313, retro_chof_554, retro_chof_585, retro_chof_607, retro_chof_758, retro_chof_913,
Equus caballus ENSECAG00000007201 possible_ortholog 4 retrogenes
retro_ecab_1115, retro_ecab_26, retro_ecab_369, retro_ecab_698,
Felis catus ENSFCAG00000030450 ortholog_one2one 38 retrogenes
retro_fcat_1014, retro_fcat_1063, retro_fcat_1173, retro_fcat_1185, retro_fcat_1186, retro_fcat_1340, retro_fcat_1402, retro_fcat_144, retro_fcat_1515, retro_fcat_1526, retro_fcat_16, retro_fcat_1600, retro_fcat_1620, retro_fcat_1665, retro_fcat_1674, retro_fcat_1779, retro_fcat_1819, retro_fcat_1847, retro_fcat_1857, retro_fcat_1863, retro_fcat_191, retro_fcat_1912, retro_fcat_1981, retro_fcat_319, retro_fcat_357, retro_fcat_412, retro_fcat_435, retro_fcat_438, retro_fcat_499, retro_fcat_510, retro_fcat_660, retro_fcat_740, retro_fcat_745, retro_fcat_893, retro_fcat_936, retro_fcat_95, retro_fcat_979, retro_fcat_997,
Loxodonta africana ENSLAFG00000032737 ortholog_one2many 1 retrogene
retro_lafr_14,
Mustela putorius furo ENSMPUG00000017189 possible_ortholog 4 retrogenes
retro_mputfur_121, retro_mputfur_76, retro_mputfur_8, retro_mputfur_85,
Nomascus leucogenys ENSNLEG00000004789 possible_ortholog 12 retrogenes
retro_nleu_1109, retro_nleu_125, retro_nleu_1452, retro_nleu_1642, retro_nleu_193, retro_nleu_224, retro_nleu_2808, retro_nleu_2809, retro_nleu_442, retro_nleu_497, retro_nleu_56, retro_nleu_603,
Otolemur garnettii ENSOGAG00000028498 possible_ortholog 24 retrogenes
retro_ogar_129, retro_ogar_1321, retro_ogar_1340, retro_ogar_1360, retro_ogar_1425, retro_ogar_1524, retro_ogar_160, retro_ogar_1683, retro_ogar_1766, retro_ogar_1833, retro_ogar_2032, retro_ogar_2412, retro_ogar_2416, retro_ogar_2515, retro_ogar_3247, retro_ogar_3384, retro_ogar_545, retro_ogar_56, retro_ogar_571, retro_ogar_776, retro_ogar_870, retro_ogar_891, retro_ogar_924, retro_ogar_973,
Rattus norvegicus ENSRNOG00000010746 possible_ortholog 4 retrogenes
retro_rnor_179, retro_rnor_27, retro_rnor_278, retro_rnor_327,
Sarcophilus harrisii ENSSHAG00000012782 ortholog_one2many 1 retrogene
retro_shar_580,
Sus scrofa ENSSSCG00000027637 possible_ortholog 9 retrogenes
retro_sscr_1001, retro_sscr_1054, retro_sscr_107, retro_sscr_1081, retro_sscr_165, retro_sscr_76, retro_sscr_793, retro_sscr_957, retro_sscr_989,
Tupaia belangeri ENSTBEG00000012875 ortholog_one2one 3 retrogenes
retro_tbel_3304, retro_tbel_47, retro_tbel_51,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_79 99.26 100.00
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2. retro_mmul_93 99.26 100.00
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3. retro_mmul_95 99.26 100.00
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4. retro_mmul_106 91.11 100.00
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5. retro_mmul_117 98.52 100.00
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6. retro_mmul_126 96.30 100.00
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Download FASTA sequences of all ENSMMUG00000001340 retrocopies