Parental gene: | Cnn3, ENSMUSG00000053931 |
| Aliases: | Cnn3, 1600014M03Rik, C85854, Calpo3 |
| Description: | calponin 3, acidic [Source:MGI Symbol;Acc:MGI:1919244] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 3:121426540..121458205(+) |
>ENSMUSG00000053931
ATGACCCACTTCAACAAGGGCCCTTCCTACGGGCTCTCCGCCGAAGTTAAGAACAAGATTGCATCCAAGTATGACCAGCA
GGCCGAGGAAGATCTGCGCAACTGGATAGAAGAGGTGACAGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGCTGAAGG
ACGGCATCATATTGTGCGAACTCATAAACAAGCTACAGCCAGGCTCTGTGAAGAAAGTCAACGAATCCTCACTAAATTGG
CCCCAGTTGGAGAATATCGGCAACTTCATTAAAGCTATCCAGGCTTACGGTATGAAGCCCCATGATATATTTGAAGCAAA
CGACCTCTTTGAGAATGGCAACATGACCCAGGTTCAGACGACGCTGGTGGCTCTAGCAGGTCTGGCGAAAACAAAAGGAT
TCCATACAACCATTGACATTGGCGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGCAAATTAAAGGCTGGC
CAGAGTGTAATTGGTTTACAGATGGGTACCAACAAATGTGCCAGCCAGGCGGGCATGACAGCCTATGGGACTCGGAGGCA
TCTTTATGATCCCAAGATGCAGACGGACAAACCCTTTGACCAGACCACGATTAGCCTGCAGATGGGCACCAACAAAGGGG
CCAGCCAGGCTGGGATGTTAGCACCGGGCACCAGAAGAGACATCTATGACCAGAAGCTGACATTACAGCCAGTGGACAAC
TCGACCATTTCTCTACAGATGGGCACCAACAAAGTTGCTTCCCAGAAAGGAATGAGCGTGTATGGGCTTGGGCGGCAAGT
ATATGACCCCAAGTACTGTGCCGCACCCACAGAACCTGTCATTCACAACGGAAGCCAGGGCACGGGCACCAATGGGTCGG
AAATCAGTGATAGCGATTATCAGGCAGAATACCCCGATGAATATCATGGCGAGTACCCAGACGACTACCCTCGGGAGTAC
CAGTATGGCGACGACCAGGGCATTGATTATTAG
ATGACCCACTTCAACAAGGGCCCTTCCTACGGGCTCTCCGCCGAAGTTAAGAACAAGATTGCATCCAAGTATGACCAGCA
GGCCGAGGAAGATCTGCGCAACTGGATAGAAGAGGTGACAGGCCTAGGCATTGGCACCAACTTCCAGCTGGGGCTGAAGG
ACGGCATCATATTGTGCGAACTCATAAACAAGCTACAGCCAGGCTCTGTGAAGAAAGTCAACGAATCCTCACTAAATTGG
CCCCAGTTGGAGAATATCGGCAACTTCATTAAAGCTATCCAGGCTTACGGTATGAAGCCCCATGATATATTTGAAGCAAA
CGACCTCTTTGAGAATGGCAACATGACCCAGGTTCAGACGACGCTGGTGGCTCTAGCAGGTCTGGCGAAAACAAAAGGAT
TCCATACAACCATTGACATTGGCGTTAAGTATGCAGAAAAACAAACAAGACGTTTTGATGAAGGCAAATTAAAGGCTGGC
CAGAGTGTAATTGGTTTACAGATGGGTACCAACAAATGTGCCAGCCAGGCGGGCATGACAGCCTATGGGACTCGGAGGCA
TCTTTATGATCCCAAGATGCAGACGGACAAACCCTTTGACCAGACCACGATTAGCCTGCAGATGGGCACCAACAAAGGGG
CCAGCCAGGCTGGGATGTTAGCACCGGGCACCAGAAGAGACATCTATGACCAGAAGCTGACATTACAGCCAGTGGACAAC
TCGACCATTTCTCTACAGATGGGCACCAACAAAGTTGCTTCCCAGAAAGGAATGAGCGTGTATGGGCTTGGGCGGCAAGT
ATATGACCCCAAGTACTGTGCCGCACCCACAGAACCTGTCATTCACAACGGAAGCCAGGGCACGGGCACCAATGGGTCGG
AAATCAGTGATAGCGATTATCAGGCAGAATACCCCGATGAATATCATGGCGAGTACCCAGACGACTACCCTCGGGAGTAC
CAGTATGGCGACGACCAGGGCATTGATTATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 46 .98 RPM |
| SRP007412_cerebellum | 53 .36 RPM |
| SRP007412_heart | 34 .71 RPM |
| SRP007412_kidney | 122 .12 RPM |
| SRP007412_liver | 111 .83 RPM |
| SRP007412_testis | 5 .58 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016707 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000020345 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000018128 | possible_ortholog | 3 retrogenes | |
| Echinops telfairi | ENSETEG00000010095 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000117519 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013870 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000002921 | possible_ortholog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000001690 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004326 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000004665 | within_species_paralog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000002670 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000004889 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_1052 | 95.77 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_2544 | 92.41 | 87.58 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000053931 retrocopies