Parental gene: | PGAM1, ENSPPYG00000002530 |
| Aliases: | None |
| Description: | phosphoglycerate mutase 1 [Source:RefSeq peptide;Acc:NP_001127164] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 10:96406705..96413862(+) |
>ENSPPYG00000002530
ATGGCCGCCTACAAACTGGTGCTGATCCGGCACGGCGAGAGCGCATGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGA
CGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGCTACGAGATGCTGGCTATGAGTTTGACA
TTTGCTTCACCTCAGTGCAGAAGAGAGCGATCCGGACCCTCTGGACAGTGCTAGATGCCATTGATCAGATGTGGCTGCCA
GTGGTGAGGACTTGGCGCCTCAATGAGCGGCACTATGGGGGTCTAACCGGTCTCAATAAAGCAGAAACTGCTGCAAAGCA
TGGTGAGGCCCAGGTGAAGATCTGGAGGCGCTCCTATGATGTCCCACCACCTCCGATGGAGCCCGACCATCCTTTCTACA
GCAACATCAGTAAGGATCGCAGGTATGCAGACCTCACAGAAGATCAGCTACCCTCCTGTGAGAGTCTGAAGGATACTATT
GCCAGAGCTCTGCCCTTCTGGAATGAAGAAATAGTTCCCCAGATCAAGGAGGGGAAACGTGTACTGATTGCAGCCCATGG
CAACAGCCTCCGGGGCATTGTCAAGCATCTGGAGGGTCTCTCTGAAGAGGCTATCATGGAGCTGAACCTGCCGACTGGTA
TTCCCATTGTCTATGAATTGGACAAGAACTTGAAGCCTATCAAGCCCATGCAGTTTCTGGGGGATGAAGAGACGGTGCGC
AAAGCCATGGAAGCTGTGGCTGCCCAGGGCAAGGCCAAGAAGTGA
ATGGCCGCCTACAAACTGGTGCTGATCCGGCACGGCGAGAGCGCATGGAACCTGGAGAACCGCTTCAGCGGCTGGTACGA
CGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCGAAGCGCGGCGGGCAGGCGCTACGAGATGCTGGCTATGAGTTTGACA
TTTGCTTCACCTCAGTGCAGAAGAGAGCGATCCGGACCCTCTGGACAGTGCTAGATGCCATTGATCAGATGTGGCTGCCA
GTGGTGAGGACTTGGCGCCTCAATGAGCGGCACTATGGGGGTCTAACCGGTCTCAATAAAGCAGAAACTGCTGCAAAGCA
TGGTGAGGCCCAGGTGAAGATCTGGAGGCGCTCCTATGATGTCCCACCACCTCCGATGGAGCCCGACCATCCTTTCTACA
GCAACATCAGTAAGGATCGCAGGTATGCAGACCTCACAGAAGATCAGCTACCCTCCTGTGAGAGTCTGAAGGATACTATT
GCCAGAGCTCTGCCCTTCTGGAATGAAGAAATAGTTCCCCAGATCAAGGAGGGGAAACGTGTACTGATTGCAGCCCATGG
CAACAGCCTCCGGGGCATTGTCAAGCATCTGGAGGGTCTCTCTGAAGAGGCTATCATGGAGCTGAACCTGCCGACTGGTA
TTCCCATTGTCTATGAATTGGACAAGAACTTGAAGCCTATCAAGCCCATGCAGTTTCTGGGGGATGAAGAGACGGTGCGC
AAAGCCATGGAAGCTGTGGCTGCCCAGGGCAAGGCCAAGAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 414 .74 RPM |
| SRP007412_cerebellum | 300 .72 RPM |
| SRP007412_heart | 42 .14 RPM |
| SRP007412_kidney | 141 .90 RPM |
| SRP007412_liver | 89 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016575 | ortholog_one2one | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000005630 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002467 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000171314 | ortholog_one2one | 12 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028602 | possible_ortholog | 13 retrogenes | |
| Loxodonta africana | ENSLAFG00000015979 | ortholog_one2many | 1 retrogene | |
| Microcebus murinus | ENSMICG00000007657 | possible_ortholog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000009117 | possible_ortholog | 6 retrogenes | |
| Macaca mulatta | ENSMMUG00000020027 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000004242 | possible_ortholog | 4 retrogenes | |
| Mustela putorius furo | ENSMPUG00000017045 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000011752 | possible_ortholog | 6 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000005679 | possible_ortholog | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000050585 | possible_ortholog | 7 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000018230 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000010517 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000005913 | possible_ortholog | 5 retrogenes | |
| Drosophila melanogaster | FBgn0014869 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_671 | 95.33 | 59.06 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_1325 | 89.23 | 76.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2309 | 82.65 | 82.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2554 | 60.25 | 62.60 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2639 | 70.11 | 67.72 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2881 | 86.79 | 83.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3389 | 79.50 | 62.99 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_pabe_3639 | 75.45 | 87.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_pabe_3749 | 77.93 | 57.09 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000002530 retrocopies