Parental gene:

RPL37A, ENSPVAG00000006102

Aliases:None
Description:ribosomal protein L37a [Source:HGNC Symbol;Acc:10348]
Organism:Megabat (Pteropus vampyrus)
Coordinates:GeneScaffold_1761:73362..75356(+)


>ENSPVAG00000006102
GCTAAACGCACCAAGAAGGTCGGTATCGTTGGTAAATACGGGACTCGTTATGGCGCCTCCCTCAGGAAAATGGTGAAGAA
AATTGAAATCAGCCAGCACGCCAAGTACACTTGCTCCTTCTGTGGCAAAACCAAGATGAAGAGAAGAGCTGTGGGAATCT
GGCACTGTGGTTCCTGCATGAAAACAGTAGCTGGTGGTGCCTGGACCTACAACACCACTTCTGCCGTCACAGTAAAGTCT
GCCATCAGAAGACTGAAGGAATTGAAAGACCAGTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003377 possible_ortholog 24 retrogenes
retro_amel_109, retro_amel_1170, retro_amel_1197, retro_amel_1204, retro_amel_1248, retro_amel_1310, retro_amel_1349, retro_amel_1534, retro_amel_1597, retro_amel_1724, retro_amel_1815, retro_amel_1910, retro_amel_1929, retro_amel_248, retro_amel_424, retro_amel_428, retro_amel_475, retro_amel_482, retro_amel_606, retro_amel_737, retro_amel_809, retro_amel_83, retro_amel_920, retro_amel_942,
Latimeria chalumnae ENSLACG00000011578 ortholog_one2one 1 retrogene
retro_lcha_71,
Loxodonta africana ENSLAFG00000006849 possible_ortholog 5 retrogenes
retro_lafr_1010, retro_lafr_1015, retro_lafr_109, retro_lafr_987, retro_lafr_991,
Macropus eugenii ENSMEUG00000004680 ortholog_one2one 23 retrogenes
retro_meug_1094, retro_meug_111, retro_meug_1120, retro_meug_1289, retro_meug_1302, retro_meug_1399, retro_meug_1600, retro_meug_1705, retro_meug_2021, retro_meug_2061, retro_meug_2143, retro_meug_2173, retro_meug_24, retro_meug_290, retro_meug_458, retro_meug_463, retro_meug_496, retro_meug_502, retro_meug_571, retro_meug_691, retro_meug_813, retro_meug_814, retro_meug_83,
Otolemur garnettii ENSOGAG00000000817 ortholog_one2one 3 retrogenes
retro_ogar_1317, retro_ogar_3003, retro_ogar_69,
Petromyzon marinus ENSPMAG00000000001 ortholog_one2one 1 retrogene
retro_pmar_11,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pvam_48 70.97 100.00
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2. retro_pvam_90 87.95 91.21
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3. retro_pvam_169 86.96 100.00
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4. retro_pvam_204 81.72 100.00
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5. retro_pvam_343 78.89 98.90
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6. retro_pvam_652 69.62 84.62
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7. retro_pvam_658 70.21 100.00
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8. retro_pvam_669 89.01 100.00
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9. retro_pvam_761 77.42 100.00
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10. retro_pvam_765 77.38 92.31
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11. retro_pvam_1074 74.47 100.00
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12. retro_pvam_1346 88.89 75.82
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Download FASTA sequences of all ENSPVAG00000006102 retrocopies