Parental gene:

ENSAMEG00000003377

Aliases:None
Description:None
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL192367.1:2310298..2312491(-)


>ENSAMEG00000003377
CAGGCTAAACGCACCAAGAAGGTCGGAATCGTGGGTAAATACGGGACCCGTTATGGTGCCTCCCTCAGGAAAATGGTGAA
GAAGATTGAAATAAGCCAGCACGCCAAGTACACTTGCTCCTTCTGTGGCAAAACCAAGATGAAAAGACGAGCTGTGGGGA
TCTGGCATTGTGGCTCCTGCATGAAGACCGTCGCTGGCGGCGCCTGGACCTACAACACCACTTCTGCTGTCACAGTAAAG
TCTGCCATCAGAAGACTGAAGGAGTTGAAAGACCAG

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000012417 ortholog_one2one 7 retrogenes
Equus caballus ENSECAG00000012046 ortholog_one2one 6 retrogenes
Latimeria chalumnae ENSLACG00000011578 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000006849 ortholog_one2one 5 retrogenes
Macropus eugenii ENSMEUG00000004680 ortholog_one2many 23 retrogenes
Myotis lucifugus ENSMLUG00000000762 ortholog_one2one 1 retrogene
Otolemur garnettii ENSOGAG00000000817 possible_ortholog 3 retrogenes
Petromyzon marinus ENSPMAG00000000001 ortholog_one2many 1 retrogene
Pteropus vampyrus ENSPVAG00000006102 possible_ortholog 12 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_83 86.81 98.91
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2. retro_amel_109 69.66 96.74
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3. retro_amel_248 73.63 97.83
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4. retro_amel_424 70.93 93.48
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5. retro_amel_428 75.00 98.91
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6. retro_amel_475 61.11 76.09
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7. retro_amel_482 56.60 56.52
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8. retro_amel_606 77.05 66.30
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9. retro_amel_737 73.33 65.22
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10. retro_amel_809 80.43 98.91
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11. retro_amel_920 82.35 90.22
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12. retro_amel_942 55.81 91.30
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13. retro_amel_1170 58.62 94.57
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14. retro_amel_1197 80.43 97.83
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15. retro_amel_1204 68.97 93.48
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16. retro_amel_1248 76.14 94.57
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17. retro_amel_1310 72.50 86.96
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18. retro_amel_1349 69.57 98.91
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19. retro_amel_1534 70.51 84.78
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20. retro_amel_1597 74.24 69.57
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21. retro_amel_1724 76.92 98.91
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22. retro_amel_1815 68.48 98.91
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23. retro_amel_1910 66.30 98.91
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24. retro_amel_1929 72.09 93.48
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Download FASTA sequences of all ENSAMEG00000003377 retrocopies