Parental gene:

ENSLAFG00000006849

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_3:10545592..10547591(-)


>ENSLAFG00000006849
CAGGCAAAACGCACCAAGAAGGTCGGTATCGTCGGTAAATATGGGACCCGTTATGGTGCCTCCCTCAGGAAAATGGTGAA
GAAAATTGAAATCAGCCAACATGCCAAGTACACTTGCTCCTTCTGCGGCAAAACCAAAATGAAGAGACGAGCTGTGGGGA
TCTGGCACTGTGGTTCCTGCATGAAAACGGTAGCTGGTGGTGCCTGGACCTACAATACCACCTCTGCAGTCACAGTTAAG
TCCGCCATCAGAAGACTGAAGGAATTGAAAGACCAGTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003377 ortholog_one2one 24 retrogenes
retro_amel_109, retro_amel_1170, retro_amel_1197, retro_amel_1204, retro_amel_1248, retro_amel_1310, retro_amel_1349, retro_amel_1534, retro_amel_1597, retro_amel_1724, retro_amel_1815, retro_amel_1910, retro_amel_1929, retro_amel_248, retro_amel_424, retro_amel_428, retro_amel_475, retro_amel_482, retro_amel_606, retro_amel_737, retro_amel_809, retro_amel_83, retro_amel_920, retro_amel_942,
Callithrix jacchus ENSCJAG00000012417 ortholog_one2one 7 retrogenes
retro_cjac_1060, retro_cjac_1514, retro_cjac_159, retro_cjac_237, retro_cjac_3178, retro_cjac_335, retro_cjac_888,
Equus caballus ENSECAG00000012046 ortholog_one2one 6 retrogenes
retro_ecab_220, retro_ecab_48, retro_ecab_552, retro_ecab_735, retro_ecab_741, retro_ecab_803,
Latimeria chalumnae ENSLACG00000011578 ortholog_one2many 1 retrogene
retro_lcha_71,
Macropus eugenii ENSMEUG00000004680 ortholog_one2many 23 retrogenes
retro_meug_1094, retro_meug_111, retro_meug_1120, retro_meug_1289, retro_meug_1302, retro_meug_1399, retro_meug_1600, retro_meug_1705, retro_meug_2021, retro_meug_2061, retro_meug_2143, retro_meug_2173, retro_meug_24, retro_meug_290, retro_meug_458, retro_meug_463, retro_meug_496, retro_meug_502, retro_meug_571, retro_meug_691, retro_meug_813, retro_meug_814, retro_meug_83,
Myotis lucifugus ENSMLUG00000000762 ortholog_one2one 1 retrogene
retro_mluc_208,
Otolemur garnettii ENSOGAG00000000817 possible_ortholog 3 retrogenes
retro_ogar_1317, retro_ogar_3003, retro_ogar_69,
Petromyzon marinus ENSPMAG00000000001 ortholog_one2many 1 retrogene
retro_pmar_11,
Pteropus vampyrus ENSPVAG00000006102 possible_ortholog 12 retrogenes
retro_pvam_1074, retro_pvam_1346, retro_pvam_169, retro_pvam_204, retro_pvam_343, retro_pvam_48, retro_pvam_652, retro_pvam_658, retro_pvam_669, retro_pvam_761, retro_pvam_765, retro_pvam_90,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_109 95.60 98.91
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2. retro_lafr_987 70.11 93.48
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3. retro_lafr_991 71.26 94.57
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4. retro_lafr_1010 79.01 88.04
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5. retro_lafr_1015 82.42 96.74
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Download FASTA sequences of all ENSLAFG00000006849 retrocopies