Parental gene:

RPS16, ENSSTOG00000006794

Aliases:None
Description:ribosomal protein S16 [Source:HGNC Symbol;Acc:10396]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393471.1:2271805..2274766(-)


>ENSSTOG00000006794
CTGCTCTGTACGCTCGCAGCCATGCCGGCCAAGGGTCCACTTCAGTCCGTACAAGTCTTCGGACGCAAGAAGACGGCCAC
AGCCGTGGCGCACTGCAAACGGGGCAACGGCCTTATCAAGGTGAATGGGCGTCCGCTGGAGATGATCGAGCCGCGCACGC
TGCAATACAAGTTACTGGAACCTGTTCTGCTTCTGGGCAAGGAGCGGTTTGCTGGCGTGGACATCCGGGTCCGTGTGAAG
GGTGGTGGTCATGTGGCCCAGATTTATGCTATCCGCCAGTCAATTTCCAAAGCCCTGGTGGCCTATTACCAGAAATATGT
AGATGAGGCTTCTAAGAAGGAGATCAAAGACATCCTCATCCAGTATGACCGGACCCTGCTGGTCGCTGACCCCCGTCGCT
GCGAGTCCAAAAAGTTTGGAGGTCCTGGTGCTCGTGCTCGCTACCAGAAATCCTACCGATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014176 ortholog_one2one 1 retrogene
retro_acar_194,
Bos taurus ENSBTAG00000021093 possible_ortholog 3 retrogenes
retro_btau_1509, retro_btau_167, retro_btau_441,
Callithrix jacchus ENSCJAG00000014170 possible_ortholog 6 retrogenes
retro_cjac_2641, retro_cjac_2737, retro_cjac_3019, retro_cjac_885, retro_cjac_905, retro_cjac_949,
Cavia porcellus ENSCPOG00000011359 possible_ortholog 3 retrogenes
retro_cpor_1266, retro_cpor_1408, retro_cpor_1515,
Felis catus ENSFCAG00000010743 possible_ortholog 4 retrogenes
retro_fcat_1258, retro_fcat_1709, retro_fcat_1806, retro_fcat_1976,
Gorilla gorilla ENSGGOG00000014414 possible_ortholog 10 retrogenes
retro_ggor_110, retro_ggor_1250, retro_ggor_1344, retro_ggor_1664, retro_ggor_1766, retro_ggor_193, retro_ggor_2423, retro_ggor_2819, retro_ggor_652, retro_ggor_667,
Macaca mulatta ENSMMUG00000019370 possible_ortholog 8 retrogenes
retro_mmul_1018, retro_mmul_1080, retro_mmul_1175, retro_mmul_1219, retro_mmul_1403, retro_mmul_20, retro_mmul_767, retro_mmul_862,
Nomascus leucogenys ENSNLEG00000014388 ortholog_one2one 3 retrogenes
retro_nleu_1266, retro_nleu_248, retro_nleu_46,
Otolemur garnettii ENSOGAG00000004497 possible_ortholog 4 retrogenes
retro_ogar_1229, retro_ogar_1309, retro_ogar_1313, retro_ogar_98,
Oreochromis niloticus ENSONIG00000000006 ortholog_one2one 1 retrogene
retro_onil_52,
Pelodiscus sinensis ENSPSIG00000016930 ortholog_one2one 1 retrogene
retro_psin_55,
Rattus norvegicus ENSRNOG00000019578 possible_ortholog 3 retrogenes
retro_rnor_10, retro_rnor_1823, retro_rnor_302,
Sus scrofa ENSSSCG00000010712 ortholog_one2one 1 retrogene
retro_sscr_731,
Sus scrofa ENSSSCG00000020817 possible_ortholog 3 retrogenes
retro_sscr_478, retro_sscr_5, retro_sscr_723,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_321 62.92 56.21
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Download FASTA sequences of all ENSSTOG00000006794 retrocopies