Parental gene:

RPL32, ENSSTOG00000026505

Aliases:None
Description:ribosomal protein L32 [Source:HGNC Symbol;Acc:10336]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393412.1:982676..986393(+)


>ENSSTOG00000026505
ATGGCTGCCCTCAGACCCCTCGTGAAGCCCAAAATCGTCAAAAAGAGGACCAAGAAGTTCATCCGGCACCAGTCAGACCG
ATATGTCAAAATTAAGCGCAACTGGCGGAAACCCAGAGGGATCGACAACCGGGTGCGGAGGAGGTTCAAGGGCCAGATCT
TGATGCCCAACATTGGTTACGGGAGCAACAAGAAAACCAAGCACATGCTGCCCAGTGGCTTCCGCAAGTTCCTGGTGCAC
AACGTCAAGGAGCTGGAGGTGCTGCTCATGTGTAACAAATCTTACTGTGCGGAGATTGCCCACAACGTTTCCTCCAAGAA
CCGCAAAGCCATCGTGGAGAGAGCAGCCCAGCTGGCCATCAGAGTCACCAACCCCAACGCCAGGCTGCGCAGTGAAGAAA
ATGAATAG

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014763 ortholog_one2many 3 retrogenes
retro_acar_104, retro_acar_125, retro_acar_67,
Ailuropoda melanoleuca ENSAMEG00000004583 possible_ortholog 26 retrogenes
retro_amel_1004, retro_amel_1041, retro_amel_1059, retro_amel_112, retro_amel_1274, retro_amel_1284, retro_amel_13, retro_amel_1394, retro_amel_1450, retro_amel_150, retro_amel_1651, retro_amel_168, retro_amel_1766, retro_amel_1827, retro_amel_1897, retro_amel_274, retro_amel_275, retro_amel_44, retro_amel_573, retro_amel_658, retro_amel_71, retro_amel_776, retro_amel_781, retro_amel_871, retro_amel_892, retro_amel_923,
Bos taurus ENSBTAG00000015283 possible_ortholog 10 retrogenes
retro_btau_1102, retro_btau_1391, retro_btau_1568, retro_btau_1645, retro_btau_1728, retro_btau_1764, retro_btau_377, retro_btau_623, retro_btau_631, retro_btau_654,
Choloepus hoffmanni ENSCHOG00000013534 possible_ortholog 27 retrogenes
retro_chof_1131, retro_chof_1164, retro_chof_1181, retro_chof_1234, retro_chof_1461, retro_chof_152, retro_chof_1821, retro_chof_1957, retro_chof_2022, retro_chof_205, retro_chof_2090, retro_chof_2146, retro_chof_2242, retro_chof_2265, retro_chof_2301, retro_chof_2410, retro_chof_2509, retro_chof_2527, retro_chof_2606, retro_chof_276, retro_chof_286, retro_chof_313, retro_chof_554, retro_chof_585, retro_chof_607, retro_chof_758, retro_chof_913,
Cavia porcellus ENSCPOG00000019967 ortholog_one2one 2 retrogenes
retro_cpor_1241, retro_cpor_608,
Equus caballus ENSECAG00000007201 possible_ortholog 4 retrogenes
retro_ecab_1115, retro_ecab_26, retro_ecab_369, retro_ecab_698,
Erinaceus europaeus ENSEEUG00000011609 ortholog_one2one 5 retrogenes
retro_eeur_161, retro_eeur_247, retro_eeur_300, retro_eeur_39, retro_eeur_576,
Homo sapiens ENSG00000144713 ortholog_one2one 20 retrogenes
retro_hsap_1013, retro_hsap_1115, retro_hsap_1547, retro_hsap_1789, retro_hsap_1956, retro_hsap_2618, retro_hsap_2821, retro_hsap_2891, retro_hsap_3024, retro_hsap_3450, retro_hsap_3536, retro_hsap_3582, retro_hsap_3726, retro_hsap_3805, retro_hsap_3936, retro_hsap_3982, retro_hsap_4008, retro_hsap_4155, retro_hsap_4677, retro_hsap_814,
Loxodonta africana ENSLAFG00000032737 ortholog_one2one 1 retrogene
retro_lafr_14,
Myotis lucifugus ENSMLUG00000022528 ortholog_one2one 6 retrogenes
retro_mluc_100, retro_mluc_1283, retro_mluc_173, retro_mluc_2224, retro_mluc_2256, retro_mluc_48,
Sarcophilus harrisii ENSSHAG00000012782 ortholog_one2many 1 retrogene
retro_shar_580,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_370 58.59 73.33
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2. retro_itri_885 73.44 94.07
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3. retro_itri_948 69.78 100.00
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4. retro_itri_1294 63.33 86.67
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5. retro_itri_1322 72.12 76.30
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6. retro_itri_1465 57.97 100.00
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7. retro_itri_1639 66.95 84.44
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8. retro_itri_1715 62.30 88.89
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9. retro_itri_1748 58.21 98.52
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Download FASTA sequences of all ENSSTOG00000026505 retrocopies