RetrogeneDB ID: | retro_chof_1621 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_343624:479..897(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSCHOG00000012440 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFV2 | ||
Ensembl ID: | ENSCHOG00000013714 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717] |
Percent Identity: | 67.61 % |
Parental protein coverage: | 55.12 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | VPPMRVYEVATFYTMYN-RKPVGKYHIQVCTTTPCMLRDSDSILEAIQRKLGINVGETTPDKLFTLIEVE |
VPPMRV.EVAT..TM....KPVGK.HIQVCT..P....DS.S.LEA...KLGI...ET.PDKLF.L.EVE | |
Retrocopy | VPPMRV*EVATSFTMHD<LKPVGKCHIQVCTIAPYTFPDSHSVLEAFPKKLGIKAEETIPDKLFALREVE |
Parental | CLG-ACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKIPKPGPRSGRFSCEPAGGLTSLTEPPKGPGFG |
CL..A.VNAPMVQIN.NYYE.LTPKDIE....E.KAG.IPKP.P..G.FSCEPAGGL..LT.P.KGP.F. | |
Retrocopy | CLQ<AGVNAPMVQINHNYYEELTPKDIEDTVVEPKAGRIPKPRPVCGHFSCEPAGGLSFLTIPLKGPDFH |
Parental | VQ |
VQ | |
Retrocopy | VQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |