RetrogeneDB ID: | retro_tbel_3333 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_137689:5794..6266(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFV2 | ||
Ensembl ID: | ENSTBEG00000015426 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717] |
Percent Identity: | 86.25 % |
Parental protein coverage: | 67.81 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | WLP-ISAMNKVAEVLEVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRN-SDSILEAIQKKLGIK |
WLP.ISAMNK.AEVL.VPPMRVYEV.TF.TM.NRKPVGKY.IQVCT..P.ML.N.SDS.LEAIQKK.G.K | |
Retrocopy | WLP<ISAMNKAAEVLPVPPMRVYEVSTFHTMCNRKPVGKYGIQVCTAPPRMLQN<SDSVLEAIQKKPGVK |
Parental | VGETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKMPKPGPRSGRFSCEPAG |
VGETTPDKLFTLIEVECLGACVNAPMVQ.ND.YYEDLTPKD.EEII.EL..GKMPKPGPRSGRFSCEPAG | |
Retrocopy | VGETTPDKLFTLIEVECLGACVNAPMVQVNDIYYEDLTPKDTEEIIGELETGKMPKPGPRSGRFSCEPAG |
Parental | GLTSLTEPPKGPGFGVQAGL |
GL.SLTEPPKGPGFGVQAGL | |
Retrocopy | GLPSLTEPPKGPGFGVQAGL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |