RetrogeneDB ID: | retro_tbel_2667 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_115942:47454..47929(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFV2 | ||
Ensembl ID: | ENSTBEG00000015426 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717] |
Percent Identity: | 77.64 % |
Parental protein coverage: | 68.24 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | KTAAQNGAGGALFVHRDTPE-NNPNTPFDFTPENYKRIEAIVKNYPEGHKAAAVLPV-LDLAQRQNGWLP |
KTAAQNGAGGALFVHRD.PE..NPNTPFD.TP.N.KRIEAIVKN.PEGH.AAA.L...LD.AQRQ.GW.P | |
Retrocopy | KTAAQNGAGGALFVHRDAPE<DNPNTPFDVTPGNCKRIEAIVKNHPEGHNAAACLQA<LDSAQRQQGWFP |
Parental | ISAMNKVAEVLEVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGIKVGETT |
.SAMN..AEVL.VPPM...EVAT.YT...RKPVGKYHIQVC..TPC.LRNSDS.LEAI..K.G.KVGETT | |
Retrocopy | VSAMNQAAEVLAVPPMTL*EVATVYTTSKRKPVGKYHIQVCAATPCTLRNSDSTLEAIRRKFGRKVGETT |
Parental | PDKLFTLIEVECLGACVNAPM |
PD.LF.LIEVECLGACVNAPM | |
Retrocopy | PDQLFPLIEVECLGACVNAPM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |