RetrogeneDB ID: | retro_tbel_1522 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4989:73731..74143(-) | ||
Located in intron of: | ENSTBEG00000006345 | ||
Retrocopyinformation | Ensembl ID: | ENSTBEG00000007408 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NDUFV2 | ||
Ensembl ID: | ENSTBEG00000015426 | ||
Aliases: | None | ||
Description: | NADH dehydrogenase (ubiquinone) flavoprotein 2, 24kDa [Source:HGNC Symbol;Acc:7717] |
Percent Identity: | 71.33 % |
Parental protein coverage: | 60.94 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | WLPISAMNKVAEVLEVPPMRVYEVATFYTMYNRKPVGKYHIQVCTTTPCMLRNSDSILEAIQKKLGI-KV |
WL..SAMNKVA.VL.VPP.RVYEVAT.YT.YNR......H.QVCT.TPC.LRN.....EAIQKKLG..K. | |
Retrocopy | WLVTSAMNKVAGVLQVPPVRVYEVATVYTTYNRE----HHVQVCTATPCRLRN*QQ-MEAIQKKLGL>KL |
Parental | GETTPDKLFTLIEVECLGACVNAPMVQINDNYYEDLTPKDIEEIIDELKAGKMPKPGPRSGRFSCEPAGG |
............EVECLGACVNAPMVQINDNY.EDLTP.DIEEIIDELKAGKMPKPGPRSG..SCEPAGG | |
Retrocopy | RDYA*QTFHSISEVECLGACVNAPMVQINDNYHEDLTPNDIEEIIDELKAGKMPKPGPRSG*LSCEPAGG |
Parental | LTS |
L.S | |
Retrocopy | LSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |