RetrogeneDB ID: | retro_mputfur_1284 | ||
Retrocopylocation | Organism: | Ferret (Mustela putorius furo) | |
Coordinates: | GL897067.1:3384675..3385311(+) | ||
Located in intron of: | ENSMPUG00000007191 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL3 | ||
Ensembl ID: | ENSMPUG00000013271 | ||
Aliases: | None | ||
Description: | ribosomal protein L3 [Source:HGNC Symbol;Acc:10332] |
Percent Identity: | 97.64 % |
Parental protein coverage: | 52.61 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | EKLDWARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR |
.KLDWARERLEQQVPVNQVFGQDE.IDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR | |
Retrocopy | KKLDWARERLEQQVPVNQVFGQDEVIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPAR |
Parental | VAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV |
VAFSVARAGQKGYHH.TEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV | |
Retrocopy | VAFSVARAGQKGYHHCTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFV |
Parental | MLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE |
MLKGCVVGTKK.VLTLRKSLLVQTKR.ALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE | |
Retrocopy | MLKGCVVGTKK*VLTLRKSLLVQTKRQALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRIAKEE |
Parental | GA |
GA | |
Retrocopy | GA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |