RetrogeneDB ID: | retro_meug_412 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold111134:1437..2247(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL3 | ||
Ensembl ID: | ENSMEUG00000009789 | ||
Aliases: | None | ||
Description: | ribosomal protein L3 [Source:HGNC Symbol;Acc:10332] |
Percent Identity: | 88.19 % |
Parental protein coverage: | 67.41 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | YCKKWQDEDGKKQLEKDLSSMKKYCQVIRVIAHTQMRLLPLRQKKSHLMEIQVNGGSVAEKLDWAREKLE |
YCKKWQDEDGKKQL.KDLS.MKKYCQVI..IAHTQMR.LPLRQK.SH.MEIQVNGGS.AEKLDWA.EKLE | |
Retrocopy | YCKKWQDEDGKKQLKKDLSNMKKYCQVIYIIAHTQMRVLPLRQK-SHVMEIQVNGGSMAEKLDWASEKLE |
Parental | QQVPVSTVFGQDEMIDVIGVTKGKGYKXXXSRWHTKKLPRKTHRGLRKVACIGAWHPARVAFSVARAGQK |
QQVPVSTVFGQ.EMIDVI.V.KGKGYK...S.WHTKKLP.K.HRGL.KVACIGAWHP.RVAFSVARAGQK | |
Retrocopy | QQVPVSTVFGQEEMIDVIWVMKGKGYKDVTSVWHTKKLPPKIHRGLLKVACIGAWHPVRVAFSVARAGQK |
Parental | GYHHRTEINKKIYKIGQGFQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGTKK |
GYHH.TEINKKIYKIGQG.QIKDGKLIKNNASTDYDLS.KSINPLGGFVHY.EVTNDFIMLKGCVVGTKK | |
Retrocopy | GYHHLTEINKKIYKIGQGYQIKDGKLIKNNASTDYDLSNKSINPLGGFVHYDEVTNDFIMLKGCVVGTKK |
Parental | RVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTVEEKKAFMGPLKKDRVAKEEVA |
RVLTLRKSLLVQTK.RALEKIDLKF.D.TSKFGHG.FQTVEEKKAFMGPLKKD...KEE.A | |
Retrocopy | RVLTLRKSLLVQTKCRALEKIDLKFTDITSKFGHGQFQTVEEKKAFMGPLKKDQIEKEEAA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |