RetrogeneDB ID: | retro_tbel_1498 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_4882:193299..193662(-) | ||
Located in intron of: | ENSTBEG00000001160 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PDCD10 | ||
Ensembl ID: | ENSTBEG00000000240 | ||
Aliases: | None | ||
Description: | programmed cell death 10 [Source:HGNC Symbol;Acc:8761] |
Percent Identity: | 95.9 % |
Parental protein coverage: | 67.78 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | YMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRAL |
YM.ERPEPEFQDLNEKA.ALKQILSKIPDE.NDRVRFLQTIKDIASAIKEL.DTVNNVFKKYQYQN.RAL | |
Retrocopy | YMTERPEPEFQDLNEKA*ALKQILSKIPDETNDRVRFLQTIKDIASAIKEL-DTVNNVFKKYQYQNHRAL |
Parental | EHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA |
EHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA | |
Retrocopy | EHQKKEFVKYSKSFSDTLKTYFKDGKAINVFVSANRLIHQTNLILQTFKTVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |