RetrogeneDB ID: | retro_tbel_2903 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_123030:44219..44493(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PDCD10 | ||
Ensembl ID: | ENSTBEG00000000240 | ||
Aliases: | None | ||
Description: | programmed cell death 10 [Source:HGNC Symbol;Acc:8761] |
Percent Identity: | 78.72 % |
Parental protein coverage: | 51.11 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | QDLNEKARALKQILSKI-PDEINDRVRFLQTIKDIASAIKELLDTVNNVFK-KYQYQNRRALEHQKKEFV |
Q..NEKA.ALKQILSK..PDEI.DRVRFLQTI.D..SAIKELL.TVN.V.K..YQYQN.RAL.HQKKEFV | |
Retrocopy | QSQNEKA*ALKQILSKL<PDEIDDRVRFLQTIEDTPSAIKELLATVNIVLK<EYQYQNHRALGHQKKEFV |
Parental | KYSKSFSDTLKTYFKDGKAINVFV |
KYSKSFSDTLK.YF..GK.INVFV | |
Retrocopy | KYSKSFSDTLKMYF*NGKVINVFV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |