RetrogeneDB ID: | retro_tsyr_1786 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_58565:520..870(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PDCD10 | ||
Ensembl ID: | ENSTSYG00000000708 | ||
Aliases: | None | ||
Description: | programmed cell death 10 [Source:HGNC Symbol;Acc:8761] |
Percent Identity: | 56.3 % |
Parental protein coverage: | 63.78 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | EKKSVEVNFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASA |
..K...VN.T..L...AAD.VEE...E...PEFQ...EKA....QI....PDEIN.R..FLQ.I.....A | |
Retrocopy | QRKYINVNITVFLICTAADHVEEDKTEGTDPEFQSVHEKAQEATQIINEVPDEINNRAKFLQAINYTDRA |
Parental | IKELLDTVNNVFKKYQY-QNRRALEHQKKEFVKYSKSFSDTLKTYFKDG |
IKE..DTVNNVF..YQY.QN.RA.E.Q.K.FVKY.KSFS...KTYFKDG | |
Retrocopy | IKE-PDTVNNVFNRYQY<QNCRAIELQNKVFVKYYKSFSSAVKTYFKDG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |