RetrogeneDB ID: | retro_tbel_4532 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_88563:22808..23108(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PDCD10 | ||
Ensembl ID: | ENSTBEG00000000240 | ||
Aliases: | None | ||
Description: | programmed cell death 10 [Source:HGNC Symbol;Acc:8761] |
Percent Identity: | 74. % |
Parental protein coverage: | 55.56 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | YMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRAL |
YM.ER.EPEFQD.NEKAR.LK...SK.PDE..DR.RFLQT..D..S.IKEL.DTVNNVFKKY.YQ..RA. | |
Retrocopy | YMPERLEPEFQDPNEKARTLK*LFSKVPDETDDRGRFLQTVRDTPSEIKELPDTVNNVFKKYRYQSFRAR |
Parental | EHQKKEFVKYSKSFSDTLKTYFKDGKAINV |
EHQKKE.VKYSK.FSDTLK.Y.KDGK.INV | |
Retrocopy | EHQKKELVKYSKGFSDTLKVYVKDGKTINV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |