RetrogeneDB ID: | retro_ogar_540 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873523.1:22597430..22598064(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PDCD10 | ||
Ensembl ID: | ENSOGAG00000013887 | ||
Aliases: | None | ||
Description: | programmed cell death 10 [Source:HGNC Symbol;Acc:8761] |
Percent Identity: | 92.52 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAEKENPGLTQDIIMKILEKK |
MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQT.RA.FIKAEKENPGLTQ.IIMKILEKK | |
Retrocopy | MRMTMEEMKNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTPRAVFIKAEKENPGLTQNIIMKILEKK |
Parental | SVEINFTESLLRMAADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEISDRVRFLQTIKDI-ASAIK |
SVEINFTESLL.MAADDVEEYMIERPEPEFQDLNEKA.ALKQIL.KI.DEIS.RVRFLQTIKD..ASAIK | |
Retrocopy | SVEINFTESLLCMAADDVEEYMIERPEPEFQDLNEKA*ALKQILGKILDEISNRVRFLQTIKDM<ASAIK |
Parental | ELLDTVN-NVFKKYQYQNRRALEHQKKEFVKYSKSFSDTLKTYFKDGKAINVFMSANRLIHQTNLILQTF |
ELLDTVN..VFKKYQYQNRRALEHQKKEFVKY.KSFSD.LKTYFKDGKAINVFMSA.RLIHQTNLILQT. | |
Retrocopy | ELLDTVN<YVFKKYQYQNRRALEHQKKEFVKYTKSFSDALKTYFKDGKAINVFMSASRLIHQTNLILQTL |
Parental | KTVA |
KTVA | |
Retrocopy | KTVA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |