Parental gene:

FOXR1, ENSBTAG00000014606

Aliases:LOC788135, FOXR1
Description:None
Organism:Cow (Bos taurus)
Coordinates:15:30085142..30094889(+)


>ENSBTAG00000014606
GTGGACCTGAAACTGCAGCACGTCGACTTCTGGGCCAGCCTCCATGGCCAGGTCCCGGGGCTGCTGGACTGGGACATGGG
GAACGAGTCCTTTCTGGCCTTCGCCACGTCGCACCTGCCCTTAGCCGAACAGAACCTTGCCAGATATAAACTCCGAATAG
TTGAGCCACCAATGTTACCTCTGGAAAAAAAACCCAACCCTGATAAAGATGGTCCAGATTTTGAGCCCAACCTGTGGATG
TGGGTAGACCCCAACATCATGTTCCCCCCTGGAAAGCTGGAGGTCCCAGAACCCAGTAAGGGGAAGAATCTGACAACCAC
AGCTCCCTCCCCTCAGCCAGTCCCAAAAGAAGACTTTGCCAAATGTCCGGAGGCCACAGAGGTGGAGTTGCTGTCACCCC
CTGGAGACCAGTGTTCCCCTTGGAAGCGGTTTGCCACTTCCCTCAGCAACTGGGAGCTCACAGAAGAGAAGGAGGCTGAG
GACCAGGATGACCGCTCCTCTGTGGCTCTCCCGTCCTCTCACAAACCGGCCCCCCTCCAGAGTCGGAGGCTTCGGCAAGC
CAACAGCCAGGAGGGGAGGCTCTGGTCCAGGCCCCCTCTCAATTACTTCCACCTAATTGCACTGGCATTAAGAAACAGTG
CCCCCTGTGGCCTCAACGTGCAACAGATCTACAGTTTCACTCGACAACATTTCCCCTTTTTCCGGACGGCTCCGGAAGGC
TGGAAGAATACCGTGCGTCACAATCTCTGTTTCCGAGACAGCTTCGAGAAGGTGCCGGTCAGCATGCAGGGTGGGGTCAG
CTCACGGCCCCGATCCTGCCTCTGGAAGTTGACTGACGAGGGACACCGCCGCTTTGCAGAAGAGGCCCGTGCCTTGGCCT
CCACCCGGCTGGAAAGGATCCAGCAGTGCATGAGCCAGCCAGATGTGATGTCCTCACTCTTTGACCTTTAG

Library Parental gene expression (RPM)
SRP017611_brain 0 .00 RPM
SRP017611_kidney 0 .00 RPM
SRP017611_liver 0 .00 RPM
ERP005899_muscle 0 .00 RPM
ERP005899_liver 0 .00 RPM
SRP030211_testis 0 .66 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000053 ortholog_one2one 1 retrogene
retro_amel_39,
Canis familiaris ENSCAFG00000012417 ortholog_one2one 1 retrogene
retro_cfam_209,
Callithrix jacchus ENSCJAG00000013656 ortholog_one2one 1 retrogene
retro_cjac_4066,
Dasypus novemcinctus ENSDNOG00000009414 ortholog_one2one 1 retrogene
retro_dnov_22,
Dipodomys ordii ENSDORG00000001960 ortholog_one2one 1 retrogene
retro_dord_651,
Homo sapiens ENSG00000176302 ortholog_one2one 1 retrogene
retro_hsap_72,
Microcebus murinus ENSMICG00000002680 ortholog_one2one 1 retrogene
retro_mmur_38,
Macaca mulatta ENSMMUG00000022722 ortholog_one2one 1 retrogene
retro_mmul_125,
Mustela putorius furo ENSMPUG00000004890 ortholog_one2one 1 retrogene
retro_mputfur_161,
Nomascus leucogenys ENSNLEG00000007376 ortholog_one2one 1 retrogene
retro_nleu_50,
Otolemur garnettii ENSOGAG00000007258 ortholog_one2one 1 retrogene
retro_ogar_296,
Procavia capensis ENSPCAG00000010132 ortholog_one2one 1 retrogene
retro_pcap_12,
Pongo abelii ENSPPYG00000003947 ortholog_one2one 1 retrogene
retro_pabe_69,
Pan troglodytes ENSPTRG00000004358 ortholog_one2one 1 retrogene
retro_ptro_94,
Sorex araneus ENSSARG00000011319 ortholog_one2one 1 retrogene
retro_sara_38,
Sus scrofa ENSSSCG00000015101 ortholog_one2one 1 retrogene
retro_sscr_36,
Ictidomys tridecemlineatus ENSSTOG00000014321 ortholog_one2one 1 retrogene
retro_itri_158,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_189 60.44 100.00
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Download FASTA sequences of all ENSBTAG00000014606 retrocopies