Parental gene:

FOXR1, ENSDNOG00000009414

Aliases:None
Description:forkhead box R1 [Source:HGNC Symbol;Acc:29980]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_77316:457..2617(-)


>ENSDNOG00000009414
GCCAGATACAGACTCCGGTTAGTTAAGCCTCCAAAACTGCCTCTGGAGAAGAAACCCAGACCTGACAGAGATGGTCCTGA
CATTGAACCCAACCTGTGGATGTGGGTCAACTCCAACATCGTGTACCCCCCCGGGAAGCTGGAGGCCGCAGCAAGAGAGG
CTCTGACAAGCACACTCTGCCCTCAGCCGCCCCCAAAAGAGGAAGAGTCCAGCTGCCCCAAGGTCACGGTGGTGGAGGCA
CTGCCGCCCTGCTCCAGTGAGGAGTCTCCCCCAGGGAAGTGGTTTGCCTCTTCCCCGAGCGACTGGGAGCTTACAGAAGA
GGAGGAGGCTGAGAACCACGATGACAGCTCCTTTGGGGCTCTCTCACCTCCACACAAAAAGGGCTCGCTCCAGAGTCGGA
GGCTTCGGCAAGCCAGCAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACTCAACAGCATTTCCCCTTCTTCCAGAC
GGCTCCAGAAGGCTGGAAGAATACCGTCCGCCACAACCTGTGCTTCCGCGACAGCTTTGAGAAAGTGCCGGTGAGCGTGC
AGGGCGGGAGCAGCGCGCGGCCTCGATCCTGCCTCTGGAAGCTGACCGAGGAGGGACGCCGCCGCTTCCAGGAGGAGGCC
CGCGCCCTGGAGTCCACTCGGCTGGAGAGTATCCAGCAGTGTATGAGCGAGCCA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 0 .00 RPM
SRP012922_cerebellum 0 .96 RPM
SRP012922_heart 3 .25 RPM
SRP012922_kidney 0 .82 RPM
SRP012922_liver 0 .00 RPM
SRP012922_lung 0 .00 RPM
SRP012922_quadricep_muscle 3 .63 RPM
SRP012922_spleen 0 .11 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000053 ortholog_one2one 1 retrogene
retro_amel_39,
Bos taurus ENSBTAG00000014606 ortholog_one2one 1 retrogene
retro_btau_189,
Canis familiaris ENSCAFG00000012417 ortholog_one2one 1 retrogene
retro_cfam_209,
Callithrix jacchus ENSCJAG00000013656 ortholog_one2one 1 retrogene
retro_cjac_4066,
Dipodomys ordii ENSDORG00000001960 ortholog_one2one 1 retrogene
retro_dord_651,
Homo sapiens ENSG00000176302 ortholog_one2one 1 retrogene
retro_hsap_72,
Microcebus murinus ENSMICG00000002680 ortholog_one2one 1 retrogene
retro_mmur_38,
Macaca mulatta ENSMMUG00000022722 ortholog_one2one 1 retrogene
retro_mmul_125,
Mustela putorius furo ENSMPUG00000004890 ortholog_one2one 1 retrogene
retro_mputfur_161,
Nomascus leucogenys ENSNLEG00000007376 ortholog_one2one 1 retrogene
retro_nleu_50,
Otolemur garnettii ENSOGAG00000007258 ortholog_one2one 1 retrogene
retro_ogar_296,
Procavia capensis ENSPCAG00000010132 ortholog_one2one 1 retrogene
retro_pcap_12,
Pongo abelii ENSPPYG00000003947 ortholog_one2one 1 retrogene
retro_pabe_69,
Pan troglodytes ENSPTRG00000004358 ortholog_one2one 1 retrogene
retro_ptro_94,
Sorex araneus ENSSARG00000011319 ortholog_one2one 1 retrogene
retro_sara_38,
Sus scrofa ENSSSCG00000015101 ortholog_one2one 1 retrogene
retro_sscr_36,
Ictidomys tridecemlineatus ENSSTOG00000014321 ortholog_one2one 1 retrogene
retro_itri_158,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_22 52.90 51.94
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Download FASTA sequences of all ENSDNOG00000009414 retrocopies