Parental gene:

NT5C3, ENSBTAG00000016709

Aliases:None
Description:cytosolic 5'-nucleotidase 3 [Source:RefSeq peptide;Acc:NP_001032686]
Organism:Cow (Bos taurus)
Coordinates:4:64185798..64205027(+)


>ENSBTAG00000016709
ATGCTTAATCAAGATTCTGCTGTACATGTGAAAATGATGCCAGAAATCCAGAAAAATTCAGTTCACATCAAGAACCCTAC
AAGAGTAGAAGAAATCATCTGTGGTCTTATCAAAGGAGGAGCTGCTAAACTTCAGATAATAACAGACTTTGATATGACAC
TGAGTCGATTTTCCTACAAAGGAAAAAGATGCCCATCATGTCATAATGTCATTGACAACTGTAAGCTAATCACAGATGAA
TGTCGAGAAAAGTTACTGCAACTAAAGGAAAAATATTATGCTATTGAAGTTGATCCTCTTCTTACTATAGAAGAGAAGTA
CCCTTATATAGTAGAATGGTATACTAAATCACATAGTTTGCTTGTTGAACAGGCTTTACCAAAAGCCAAACTTAAAGAAA
TTGTGGAAGAATCTGACATTATGCTCAAGGAAGGATATGAGAATTTCTTTGATAAGCTGCAACAATACGGTATTCCTGTG
TTCATATTTTCGGCTGGTATCGGTGATGTGCTAGAGGAAGTTATCCGTCAAGCTGGTGTATATTACCCAAATGTCAAAGT
GGTGTCCAACTTCATGGATTTTGATGACAATGGGCTGCTCAAAGGATTTAAAGGAGAACTAATTCATGTGTTTAACAAAC
ATGATGGTTCCTTGAAGAATACAGAATATTTCAATCAACTAAAAAACAATAGCAACATAATTCTCCTGGGAGACTCCCAA
GGGGACTTAAAAATGGCAGATGGAGTAGCCAATGTGGAACACATCCTGAAAATTGGGTATCTAAATGATAGAGTGGATGA
GCTTTTAGAAAAGTACATGGACTCTTATGATATTGTTCTAGTAAAAGATGAATCACTGGATGTAGCCAACTCTATCTTAC
AGAAGATTCTATAA

Library Parental gene expression (RPM)
SRP017611_brain 13 .16 RPM
SRP017611_kidney 54 .35 RPM
SRP017611_liver 3 .78 RPM
ERP005899_muscle 47 .72 RPM
ERP005899_liver 26 .60 RPM
SRP030211_testis 5 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006624 ortholog_one2one 1 retrogene
retro_amel_875,
Canis familiaris ENSCAFG00000003154 ortholog_one2one 1 retrogene
retro_cfam_1295,
Equus caballus ENSECAG00000011777 ortholog_one2one 1 retrogene
retro_ecab_1118,
Homo sapiens ENSG00000122643 ortholog_one2one 1 retrogene
retro_hsap_3084,
Gorilla gorilla ENSGGOG00000028164 ortholog_one2one 1 retrogene
retro_ggor_2119,
Mustela putorius furo ENSMPUG00000005546 ortholog_one2one 2 retrogenes
retro_mputfur_1175, retro_mputfur_577,
Pteropus vampyrus ENSPVAG00000013182 ortholog_one2one 2 retrogenes
retro_pvam_148, retro_pvam_706,
Rattus norvegicus ENSRNOG00000005981 ortholog_one2one 1 retrogene
retro_rnor_632,
Sus scrofa ENSSSCG00000022912 ortholog_one2one 1 retrogene
retro_sscr_540,
Ictidomys tridecemlineatus ENSSTOG00000026363 ortholog_one2one 2 retrogenes
retro_itri_1325, retro_itri_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1465 97.57 96.97
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Download FASTA sequences of all ENSBTAG00000016709 retrocopies