Parental gene:

NT5C3A, ENSCAFG00000003154

Aliases:NT5C3A, NT5C3
Description:5'-nucleotidase, cytosolic IIIA [Source:HGNC Symbol;Acc:17820]
Organism:Dog (Canis familiaris)
Coordinates:14:45074874..45131905(-)


>ENSCAFG00000003154
ATGGACCGGGCGGCCGTGGCGAGGATGGGCGCGGTGGCGAGCGCCAGTGTGTGCGTCCTGGTGGCGGGGGTGGTGCTGGC
CCAGTACATATTCACCTTGAAGAGGAAGACAGGGCGGAAGACCAAAATCATCGAGATGATGCCTGAATTCCAAAGAAGTT
CAGTTCGAATCAAGAACCCTGCAAGAGTGGAAGAAATTATCTGTGGTCTTATTAAGGGAGGAGCAGCCAAACTTCAGATA
ATAACAGACTTTGATATGACACTGAGTAGATTTTCCTATGAAGGGAAAAGATGCCCAACATGTCATTATGTCATTGACAA
CAGTAAGCTGGTTACAGATGAATGTCGAAAAAAGTTACTGCAACTAAAGGAAAAATATTATGCTATTGAAATTGATCCTG
TTCTTACCATGGAAGAGAAGTATCCCTATATGGTAGAATGGTATACTAAATCACACGGTTTGCTTGTTGAACAGGCTTTA
CCAAAAGCTAAACTTAAAGAAATTGTAGCAGAATCTGATGTTATGCTCAAGGAAGGGTATGAGAATTTCTTTGATAAACT
TCAAGAATATGGTATCCCTGTGTTCATATTTTCGGCTGGTATTGGTGATATACTAGAGGAGGTGATCCATCAAGCTGGCG
TTTATCACCCAAACATCACAGTAGTGTCCAACTTCATGGATTTTGATGACAATGGGGTGCTAAAAGGATTTAAAGGCGAA
CTAATTCATGTATTTAACAAACATGATGGTGCCTTGAAGAACACAGAATATTTCAATCGACTAAAAGACAATAGCAACAT
CATTCTGCTGGGAGATTCCCAAGGGGACATAAGAATGGCAGATGGAGTAGCCAACGTTGAACATATCCTGAAAATTGGAT
ATCTAAACGATAGAGTTGATGAGCTTTTAGAAAAGTATATGGACTCTTATGACATTGTTCTAGTAAAAGACGAATCATTG
GATGTAGCCAACTCTATCTTACAGAAGATTCTA

Library Parental gene expression (RPM)
SRP017611_brain 20 .40 RPM
SRP017611_kidney 29 .65 RPM
SRP017611_liver 27 .12 RPM
SRP012049_cerebellum 14 .36 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006624 ortholog_one2one 1 retrogene
retro_amel_875,
Bos taurus ENSBTAG00000016709 ortholog_one2one 1 retrogene
retro_btau_1465,
Equus caballus ENSECAG00000011777 ortholog_one2one 1 retrogene
retro_ecab_1118,
Homo sapiens ENSG00000122643 ortholog_one2one 1 retrogene
retro_hsap_3084,
Gorilla gorilla ENSGGOG00000028164 ortholog_one2one 1 retrogene
retro_ggor_2119,
Mustela putorius furo ENSMPUG00000005546 ortholog_one2one 2 retrogenes
retro_mputfur_1175, retro_mputfur_577,
Pteropus vampyrus ENSPVAG00000013182 ortholog_one2one 2 retrogenes
retro_pvam_148, retro_pvam_706,
Rattus norvegicus ENSRNOG00000005981 ortholog_one2one 1 retrogene
retro_rnor_632,
Sus scrofa ENSSSCG00000022912 ortholog_one2one 1 retrogene
retro_sscr_540,
Ictidomys tridecemlineatus ENSSTOG00000026363 ortholog_one2one 2 retrogenes
retro_itri_1325, retro_itri_682,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1295 70.33 59.93
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Download FASTA sequences of all ENSCAFG00000003154 retrocopies